Streptomyces halobius: K9S39_13235
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Entry
K9S39_13235 CDS
T09588
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
shau
Streptomyces halobius
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shau03032
]
K9S39_13235
03400 DNA repair and recombination proteins [BR:
shau03400
]
K9S39_13235
Enzymes [BR:
shau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K9S39_13235
DNA replication proteins [BR:
shau03032
]
Prokaryotic type
DNA Topoisomerases
K9S39_13235
DNA repair and recombination proteins [BR:
shau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K9S39_13235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UQA92662
LinkDB
All DBs
Position
complement(2860015..2862135)
Genome browser
AA seq
706 aa
AA seq
DB search
MTAEMSVPSTAVLTGADRDGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEI
IDNSVDEALGGHCDHIEVVLHDDGSVEVRDNGRGIPVDVEPKTGLSGVEVVMTKLHAGGK
FGGGSYAASGGLHGVGASVVNALSARLDIEVDRSSRTHSISFRRGVPGVFTESGPDAPFD
PANGLRKGKRVPKTKTGTRVRYWADRQIFLKDAKLSLETLHARARQTAFLVPGLTLVVRD
ERGIESAGKTEETFHYDGGISEFCEYLAQDKAVSDVLRLSGQGTFKETVPVLDDRGHMTP
TEVTRELGVDIALRWGTGYDATVRSFVNIIATPKGGTHVSGFERSVTKTVNEVLRSSKLL
RVAEDDVVKDDAMEGLTAVVTVRLAEPQFEGQTKEVLGTSAASRIVAQVVSKELKAFLTS
TKRDAKQQARAVLEKVVAAARTRIAARQHKEAQRRKTALESSSLPAKLADCRSDNVDRSE
LFIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKSSVSDMLKNAECGAIIQVIGAGSG
RTFDIDTARYGKVIFLADADVDGAHIRCLLLTLFQRYMRPMVEQGRVFSAVPPLHRVELV
NPKKGQEKYIYTYSDSELRQTLLELERKKVRYKDSIQRYKGLGEMDADQLAETTMDPRHR
TLRRINISDLEVAEKAFDLLMGNEVAPRKEFITNSASTLDRSRIDT
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgagatgtccgtgccgtccaccgcagtgctgaccggggcagaccgggacggt
tccaactacaccgcgcggcatctgctcgtccttgaggggctggaggccgtccgcaagcga
cctggtatgtacatcggctcgacggacagccgcggtctgatgcactgcctgtgggagatc
atcgacaactcggtcgatgaggcgctcggcggccactgcgaccacatcgaggtggtcctg
cacgacgacgggtcggtggaggtccgcgacaacggccgcggcatccccgtcgacgtcgag
cccaagaccggactcagtggcgtcgaggttgtcatgaccaagctgcacgccggcggaaag
ttcggcggcggctcctatgccgcctccggcggtctgcacggcgtcggcgcctcggtcgtc
aacgcgctctccgcgcgcctcgacatcgaggtggaccgcagcagcaggacccactcgatc
agcttccgccgcggcgtccccggcgtcttcaccgaatccggccccgacgccccgttcgac
cccgcgaacggcctgcgcaagggaaagcgggtgcccaagacgaagaccggcacccgggtg
cgctactgggccgaccgacagatcttcctcaaggacgccaagctctccctggagacgctg
cacgcccgcgctcgccagacggccttcctcgtaccgggcctgaccctcgtcgtccgcgac
gagcgtggcatcgagagcgccggcaaaaccgaggagaccttccactacgacggcggcatc
agcgaattctgtgaatatttggcgcaggacaaagccgtctccgacgtactgcggctcagc
ggccagggcaccttcaaggagaccgtgcccgtcctggacgaccgcggccacatgacaccc
accgaagtcacccgtgaactgggcgtcgacatcgccctccggtgggggaccggctacgac
gcgacggtcaggtcgttcgtcaacatcatcgcgacgcccaagggcggcacccatgtctcc
ggcttcgagcgctcggtcaccaagaccgtcaacgaagtgctgagatcgagcaagctgctg
cgcgtcgccgaggacgacgtcgtcaaggacgacgccatggagggcctcaccgccgtcgtc
acggtgcggctcgcggagccgcagttcgaaggccagaccaaggaggtgctcggcacctcc
gccgcctcgcggatcgtcgcccaagtggtgagcaaggaactcaaggcgttcctgacgtcc
acgaagcgggacgccaagcaacaggcgcgcgccgtcctggagaaggtcgtggccgcggcc
cgtacgcgcatcgccgcccgccagcacaaggaggcccagcggcggaagacggcgctggaa
tcctcgtcgctgccggccaagctcgccgactgccgcagcgacaacgtcgaccgcagcgaa
ctgttcatcgtcgagggagactcggcgctgggcaccgcgaagctcgcgcggaactcggaa
ttccaggcgctgctgccgatccgcggcaagattctgaacgtccagaagtcatcggtctcg
gacatgctgaagaatgccgagtgcggcgccatcatccaggtcataggggctgggtccggc
cggaccttcgacatcgacaccgcccgctacggcaaggtcatcttcctcgccgacgccgac
gtcgacggcgcccacatccgctgtctgctgctgaccctcttccagcgctatatgcgtccg
atggtcgagcagggcagggtcttttccgccgttccgccgctgcaccgcgtcgaattggtc
aatcccaagaagggtcaggaaaagtacatctacacctactcggacagcgaactgcgccag
accctgctcgaactcgaacgcaagaaggtccgctacaaggacagcatccagcgctacaag
ggcctgggcgaaatggacgccgaccaactcgccgagaccaccatggacccacgtcaccgc
accctgcgacggatcaacatcagtgatctggaagtggcggagaaggctttcgacctcctg
atgggcaacgaggtcgccccccgtaaggagttcatcaccaactccgcgtccactctggac
cgttcgcgcatcgacacctga
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