Streptomyces halobius: K9S39_13680
Help
Entry
K9S39_13680 CDS
T09588
Name
(GenBank) HAMP domain-containing protein
Organism
shau
Streptomyces halobius
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
GAF_3
RNase_Y_N
Motif
Other DBs
NCBI-ProteinID:
UQA92738
LinkDB
All DBs
Position
complement(2966239..2971764)
Genome browser
AA seq
1841 aa
AA seq
DB search
MESGAAARGASTRAKGGRSRSNGTTEVDTAALNRLLVALVAMRDGNFRKRLTVSGDGVMS
EIAAVFNEVADRNLHLTGELARVRRVVGREGKLTERLEVGAAEGSWAAAIDASNALVDDL
VRPVSEVGRVLSAVSEGDLEQRMDLRSRSSDSSSEHPLRGEFLKVGRTVNGLVDQLSAFT
DEVTRVASEVGTEGKLGGQARVRGMSGSWKDLTESVNTMASRLTAQVRDIALVTTAVAKG
DLSRKVTVHVAGEMLELKNTVNTMVDQLSSFASEVTRVAREVGTEGELGGQAQVPGVAGV
WKDLTDSVNLMAGNLTAQVRGIAQVTTAVANGDLSQKVTVSARGEVAQLADTINTMTETL
RTFADEVTRVANEVGAEGQLGGQAQVPGAAGTWKDLTDSVNNAFRNLTGQVRDIAQVTTA
VANGDLSQKVTVDVAGEMLELKNTVNTMVDQLSSFGAEVTRVAREIGVEGELGGQAAVPG
AAGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLKNTVNTM
VDQLSSFADQVTRMARDVGTEGRLGGQARVDGVSGTWKELTDSVNFMAGNLTSQVRQIAQ
VTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSAFAEQVTRVAREVGTDGRLGGQA
QVPGVAGVWRDLTDSVNGMAGNLTAQVRNIAQVATAVARGDLSQKIDVDARGEILELKNT
LNTMVDQLSSFAEQVTRVAREVGTEGILGGQAEVQGVSGTWKDLTQSVNFMANNLTSQVR
NIGEVTTAVARGDLSKKITVDAKGEILELVTTVNTMVDQLSLFAEQVTRVAREVGTEGQL
GGQARVPGVTGIWKDLSDNVNLMANNLTIQVRNISQVSAAVANGDLTKKVTVEARGEVAQ
LADTVNTMVTTLSSFADEVTRVAREVGTDGILGGQARVPGVAGTWKDLTESVNSMANNLT
GQVRNIAMVTTAIAKGDLTKKIDIDARGEILALKTTINTMVDQLSSFAEQVTRVAREVGT
EGQLGGQAQVRGVAGTWKDLTESVNEMAGNLTRQVRAIAAVAAAVTLGDHNVRIDVDAAG
EILELQDNVNTMISTLRETTLANEEQDWLKGNLARISGLMQGRRDLKDVATLIMSELSPA
VSAQHGAFFLAAQPEAREIGADGAEAGAYELRLTGSYGYSMGGMPTTFKPGETLIGTAAE
EGRTILVENVPSGYLKIASGLGEAPPANVIVLPLLFEDKVLGVIELASFQPFTQIQKDFL
SQIAEMIATSVNTISVNTKTEVLLKQSQELTEQLKERSAELESRQRALELSNSELEEKAE
QLRAQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLLILAK
LLADNAEGNLSPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALVQLVD
YVEATFRPLTAEKGLDFSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDSGAVELVI
RPAGADVPPAIREQLLEHGSLRDPDADMIAFSVTDTGIGIASSKMRVIFEAFKQADGTTS
RKYGGTGLGLSISREIARLLGGEIHAASEPSRGSTFTLYLPHNPGGLPPQGYPQLVAGGL
AMDAEAREIEVGRQDGTEEAQGAEQGASGSLNRPRRRGSSGAGRRFALPGGQSLPAPPRQ
ALQPSAAPSQPADRQPAEEPWLGNGQDLVDPAFEGGFHGEKVLIVDDDIRNVFALTSVLE
QHGLSVLYAENGREGIEVLEQHDDIVLVLMDIMMPEMDGYATTAAIRRMPQFAGLPIIAL
TAKAMKGDREKSIDSGASDYVTKPVDTDHLLSVMEHWMRTR
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcggcgcggggcgcaagtacgcgcgcgaaaggcggacgatcccgg
agcaatgggacgaccgaggtggatacggctgcgctgaatcggctgttggtagctctggtc
gccatgcgggacgggaacttccgcaaacggctgacggtgtccggcgacggcgtcatgtcg
gagatcgccgcggtcttcaacgaggtcgcggaccgtaatctgcatctcacgggcgagctg
gcccgggtgcgccgggtcgtcggacgtgagggaaagctcacggagcggctggaggtcggt
gccgccgagggctcctgggccgcggccatcgacgcctcgaacgccctggtggacgacctc
gtacggccggtctccgaggtcggacgggtgctctcggcggtgtccgagggtgacctggaa
cagcggatggatctgcggtcgcgcagttcggacagctcgtcggagcatccgctgcggggc
gagttcctgaaggtcggccgtacggtcaacggcctggtcgaccagctgtccgcgttcacc
gacgaggtcacgagagtggccagtgaggtcggtacggagggcaagctcggcgggcaggcg
cgggtgcgcgggatgtccgggtcctggaaggacctcacggaatccgtcaacaccatggcc
tcccggctcaccgcgcaggtccgtgacatcgctctcgtcaccaccgcggtcgcgaagggt
gatctgtcacggaaggtgacggttcatgtcgcgggcgagatgctggagctgaagaacacc
gtcaacacgatggtggaccagctctcctcgttcgcgtccgaggtgacccgggtcgcccgt
gaggtcggtacggagggcgagctcggcgggcaggcacaggtccccggcgtcgcgggcgtc
tggaaggacctgacggattcggtcaatctcatggccggcaacctcaccgcgcaggtgcgc
gggatcgcccaggtcacgaccgccgtcgcgaacggcgatctgtcgcagaaggtcacggtc
agcgcgcgcggcgaggtcgcgcagctcgccgacacgatcaacaccatgaccgagacgctg
cgcaccttcgcggacgaagtgacacgggtggcgaacgaggtcggcgccgagggacagctc
ggcgggcaggcgcaggtgccgggcgcggccgggacgtggaaggacctcaccgactcggtg
aacaacgccttccggaacctgaccgggcaggtgcgggacatcgcgcaggtgacgacggcg
gttgccaacggtgatctgtcgcagaaggtcaccgtcgatgtggccggtgagatgctggag
ttgaagaacaccgtcaacacgatggtggatcagctgtcgtcgttcggtgccgaagtgacg
cgtgtggcgcgggagatcggcgtcgagggtgaactgggcggccaggcggcggtgccgggc
gcggcggggacgtggaaggacctcacggactccgtgaacaccgcgttccgcaacctgacc
gggcaggtccgcaatatcgcgcaggtgacgacggcggtcgccaacggtgatctgtcgcag
aaggtcaccgtcgacgtctccggtgagatgctccagctgaagaacaccgtgaacaccatg
gtggatcagctgtcgtcgttcgcggaccaggtcacccgtatggccagggacgtgggcacg
gaaggccggctgggcgggcaggcccgggtggacggcgtcagcggcacctggaaggaactg
accgactccgtcaacttcatggcggggaacctgacgtcgcaggtgcggcagatcgcgcag
gtgacgacggcggtcgcgcgcggtgatctgtcccagaagatcgacgtggacgcgcgcggc
gagatcctggagctgaagaacaccatcaacacgatggtcgaccagctctccgccttcgcc
gagcaggtcacccgggtcgcccgggaggtcggtacggacgggcggctgggcggccaggcg
caggtgccgggcgtcgcgggcgtgtggcgcgatctgaccgactcggtgaacggcatggcc
ggcaacctgacggctcaggtccgtaacatcgcgcaggtcgccacggcggtggcgcgcggc
gatctgtcccagaagatcgatgtggacgcccggggcgagatcctggagctgaagaacacc
ctgaacacgatggtcgaccagctctcctcgttcgcggagcaggtcacccgggtcgcccgc
gaggtgggcaccgagggcatcctgggcggccaggccgaggtgcagggcgtcagcggtacc
tggaaggacctcacccagtccgtcaacttcatggcgaacaacctgacgtcgcaggtgcgc
aacatcggcgaggtgacgacggcggtcgcccgcggtgatctgtccaagaagatcaccgtc
gacgcgaagggcgagatcctcgaactcgtcacgaccgtgaacaccatggtcgaccagctc
tcgctgttcgcggagcaggtgacgcgggtcgcccgtgaggtcggcaccgaaggccaactg
ggcggccaggcacgggttccgggcgtcaccggcatctggaaggacctcagcgacaacgtc
aacctgatggccaacaacctgaccatccaggtgcgcaacatctcccaggtctcggccgcg
gtggccaacggcgatctgacgaagaaggtcacggtcgaggcgcgcggcgaggtcgcgcag
ctcgccgacacggtcaacacgatggtcaccacgctgtcgtcgttcgccgacgaggtcacc
cgggtggcccgtgaggtgggcaccgacggcatcctgggcggccaggcccgcgtccccggc
gtcgccggcacgtggaaggacctcaccgagtccgtgaactcgatggccaacaacctcacc
ggccaggtccgcaatatcgccatggtcaccaccgccatcgccaagggcgatctgaccaag
aagatcgacatcgacgcgcggggcgagatcctcgcgctgaagaccaccatcaacaccatg
gtcgaccagctgtcgtccttcgccgagcaggtcaccagggtggcccgcgaggtcggtacg
gagggccagctgggcggtcaggcgcaggtgcggggcgtggccggcacctggaaggacctg
accgaatcggtgaacgagatggcgggcaacctgacccgtcaggtgcgcgccatcgccgcg
gtcgccgccgcggtcaccctcggcgaccacaacgtccggatcgacgtggacgcggccggc
gagatcctggagctccaggacaacgtcaacaccatgatctccacgctccgtgagaccacc
ctcgccaacgaggaacaggactggctcaagggcaatctggcccggatctccggtctgatg
cagggccgccgcgacctcaaggacgtcgccacgctcatcatgagcgagctgtccccggcg
gtctccgcgcagcacggcgcgttcttcctcgcggcccagcccgaagcccgggagatcggc
gcggacggcgccgaggccggtgcgtacgagctgcggctgacgggctcgtacggctactcc
atgggcgggatgccgacgaccttcaagccgggcgagacgctgatcggcacggccgcggag
gagggccgcacgatcctggtggagaacgtgccgtccggctatctcaagatcgcctcgggg
ctcggtgaggcgccgccggcgaacgtgatcgtgctgccgctgctcttcgaggacaaggtg
ctcggcgtgatcgagctggcctcgttccagccgttcacccagatccagaaggacttcctc
agccagatcgccgagatgatcgcgaccagcgtcaacaccatctccgtcaacaccaagacc
gaggtgctgctcaagcagtcgcaggagctgaccgagcagctcaaggagcggtcggccgag
ctggagagccggcagcgggcgctggagctgtccaactccgagctggaggagaaggccgag
caactgcgcgcccagaaccgcgacatcgaggtcaagaacaccgagatcgaagaggcgcgg
caggtcctggaggagcgcgccgagcagctcgcggtctccatgcgctacaagtcggagttc
ctggcgaacatgtcgcacgagctgcgcacaccgctgaactcgctgctgattctggccaag
ttgctggccgacaacgccgaggggaatctctccccgaagcaggtcgagttcgccgagacg
atccatggcgcgggttccgacctgctccagctgatcaacgacatcctggacctgtcgaag
gtcgaggccggcaagatggacgtcagcccgacccggatcgcgctggtacagctcgtcgac
tatgtcgaggcgacgttccggccgctgaccgcggagaagggcctggacttctccgtacgg
gtctcgccggagctgcccgcgacgctgcacaccgacgagcagcggctgctgcaggtgctg
cgcaatctgctgtccaacgcggtgaagttcaccgacagcggcgccgtcgagctggtcatc
cggccggccggcgcggatgtgccgccggcgatccgggagcagctgctggagcacggttcg
ctgcgtgacccggatgccgacatgatcgccttctcggtgaccgacaccggtatcggcatc
gcgtccagcaagatgcgggtgatcttcgaggcgttcaagcaggcggacggcacgaccagc
cgcaagtacggcggtaccggtctgggcctgtccatcagccgggagatcgcccggctgctc
ggcggggagatccacgccgccagtgagcccagccgcggctcgacgttcacgctgtatctg
ccgcacaacccgggcgggctgccgccgcagggctacccgcagctggtggcgggcggtctg
gcgatggacgcggaggcccgcgagatcgaggtcgggcggcaggacgggaccgaggaggcg
cagggcgcggagcagggagcgtccgggagcctcaaccggccccgccgccgcgggtcttcg
ggcgccggacgccgcttcgcgctgcccggcggccagtcgctgcccgctccgccgcggcag
gccctccagccgtcggccgccccgtcgcagccggccgaccggcagcccgccgaggagccc
tggctcggcaacggccaggacctggtggacccggccttcgagggcggcttccacggtgag
aaggtgctgatcgtcgacgacgacatccgcaatgtcttcgcgctcaccagcgtcctggag
cagcacgggctgtcggtgctgtatgcggagaacggccgggagggcatcgaggtgctggag
cagcacgacgatatcgtcctggtcctgatggacatcatgatgccggagatggacgggtac
gcgaccacggccgcgatccgccggatgccgcagttcgccgggctgccgatcatcgcgctg
accgcgaaggcgatgaagggcgaccgggagaagagcatcgattccggggcctccgactat
gtgaccaagccggtggataccgatcatctgctgtcggtcatggagcattggatgcgtaca
cggtga
DBGET
integrated database retrieval system
