Streptomyces halobius: K9S39_13760
Help
Entry
K9S39_13760 CDS
T09588
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
shau
Streptomyces halobius
Pathway
shau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K9S39_13760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shau03019
]
K9S39_13760
03016 Transfer RNA biogenesis [BR:
shau03016
]
K9S39_13760
Enzymes [BR:
shau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K9S39_13760
Messenger RNA biogenesis [BR:
shau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K9S39_13760
Transfer RNA biogenesis [BR:
shau03016
]
Prokaryotic type
tRNA degradation factors
K9S39_13760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
KH_KhpA-B
CdsD_C
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
UQA92749
UniProt:
A0ABY4M4Q9
LinkDB
All DBs
Position
complement(2989517..2991757)
Genome browser
AA seq
746 aa
AA seq
DB search
MENETHYAEAVIDNGSFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATSASKTPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAVLTCRLIDRPLRPSFKKGLRNEIQI
VETVMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGGTRVALIKGQWVAFPTHTELEDA
VFDMVVAGRVLPDGDVAIMMVEAEATEKTVQLVKDGTEAPTEEVVAAGLEAAKPFIKVLC
KAQSDLAAKAAKPVGEFPIFLDYQDDVLEALTAAVKDELAQALTIAGKQDREAELDRVKG
LAAEKLLPQFEGREKEISAAYRSLTKSLVRERVIKEKKRIDGRGVTDIRTLAAEVEALPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIDGQTHYVALTDILGAEDAFGDMDFKVAGTKQFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAADGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLAVGAKVQVEIAEIDQRGKLSL
IPVIEGEEEDAASNSGSAAAKDDAAK
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggctccttcggcacccgt
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtggcgtac
ctggacgacgacaccatggtgctgtcggccacctccgcgtccaagaccccgaaggaccag
ctggacttcttcccgctgaccgtcgacgtcgaggagcggatgtacgcggccgggaagatc
cccggttccttcttccgccgtgagggccgtccctccgaggacgcggtgctcacctgccgc
ctcatcgaccggccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacggtcatggcgctcaaccccgaccacctctacgacgtggtcgccatcaacgcc
gcctcctgctccacgcagctggccggtctgcccttctccggcccgatcggcggcacccgc
gtcgccctgatcaagggccagtgggtcgccttccccacccacaccgagctggaggacgcc
gtcttcgacatggtcgtggccggccgggtgctgccggacggcgatgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccgtccagctggtcaaggacggtaccgaggcgccg
accgaggaggtcgtcgccgccggtctggaggccgccaagcccttcatcaaggtgctctgc
aaggcccagtcggacctcgccgccaaggccgccaagccggtcggcgagttcccgatcttc
ctcgactaccaggacgacgtcctggaggcgctgaccgccgccgtcaaggacgagctcgcc
caggcgctgaccatcgccggcaagcaggaccgcgaggccgagctggaccgcgtcaagggc
ctggccgccgagaagctgctgccgcagttcgagggccgcgagaaggagatctccgccgcg
taccgctcgctgaccaagtccctggtccgtgagcgcgtcatcaaggagaagaagcgcatc
gacggccgcggcgtcacggacatccgtacgctcgccgccgaggtcgaggcgctcccgcgg
gtgcacggctccgccctgttcgagcgtggcgagacccagatcctgggtgtcaccaccctg
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctat
atgcacaactacaacttcccgccgtactccgtcggtgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggcgcgctggccgagcgcgccatcgtgccggtgctgccg
tcccgcgaggagttcccgtacgcgatccgtcaggtctccgaggcgctgggctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccg
ctcaaggccccggtcgccggtatcgccatgggcctgatctcccaggagatcgacggccag
acgcactatgtcgccctcaccgacatcctcggtgcggaggacgccttcggtgacatggac
ttcaaggtcgccggcaccaagcagttcgtcaccgcgctgcagctcgacaccaagctcgac
ggcatccccgcctcggtcctggccgccgcgctgaagcaggcccgcgacgcgcggctgcac
atcctggacgtcatgaacgaggccatcgacgtcccggacgagatgtccccgaacgccccg
cggatcatcaccgtcaagatcccggtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
accatctacatcggtgccgccgacggcccggccgccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcacggtcgtcaag
accaccaccttcggtgcgttcgtgtcgctgctcccgggcaaggacggtctgctgcacatc
tcgcagatccgcaagcttgccggcggcaagcgcgtggagaacgtcgaggacgtgctcgcc
gtgggcgccaaggtccaggtcgagatcgccgagatcgaccagcgcgggaagctctcgctg
atcccggtcatcgagggtgaagaagaggacgctgcatccaacagcggctccgccgcggcg
aaggacgacgccgccaagtga
DBGET
integrated database retrieval system
