Streptomyces halobius: K9S39_13920
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Entry
K9S39_13920 CDS
T09588
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shau
Streptomyces halobius
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shau03016
]
K9S39_13920 (truB)
Enzymes [BR:
shau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K9S39_13920 (truB)
Transfer RNA biogenesis [BR:
shau03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K9S39_13920 (truB)
Prokaryotic type
K9S39_13920 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
DinB_2
Motif
Other DBs
NCBI-ProteinID:
UQA92779
UniProt:
A0ABY4M4U0
LinkDB
All DBs
Position
complement(3038034..3038960)
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AA seq
308 aa
AA seq
DB search
MKRQSNKPGGLVIVDKPAGFTSHDVVAKMRGMARTRRVGHAGTLDPMATGVLVLGIERAT
KLLGHLALTEKEYVGTIRLGQTTVTDDAEGEITASKAAHALAREDIDAGIAALTGEIMQI
PSKVSAIKIDGKRSYSRVRDGEDVEIPARPVTVSSFAVHSAHETEAEDGTPVTDLLVSVV
CSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYKLDQARTLERIQHAVDDAEGAGLPV
MPLGEAAAAAFTRWDVTEPAARLLLNGARIPMPRFGGDGPVAAFGPDGTFVALVENRAGR
ARSLAVFG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcagagcaacaagccgggaggccttgtcatcgtcgacaagccggccggcttc
acttcgcacgacgtcgtggcgaagatgcggggcatggcccgcacccgccgggtcgggcat
gccggcacgctcgacccgatggccacgggcgtgctcgtcctgggcatcgagcgggccacc
aagctgctcggccatctcgcgctgacggagaaggagtacgtcggcacgatccggctcggg
cagacgacggtcaccgatgacgcggagggcgagatcaccgcgtcgaaggcggcgcacgcc
ctggcccgcgaggacatcgacgccgggatcgccgcgctgaccggcgagatcatgcagatc
ccgtcgaaggtcagcgccatcaagatcgacggcaagcggtcgtactcgcgggtccgggac
ggtgaggacgtggagatcccggcccggccggtcaccgtctcctcgttcgcggtgcactcc
gcgcacgagaccgaggcggaggacggcaccccggtcaccgatctgctggtctccgtcgtc
tgctcgtccggtacgtacatccgcgcgctggcccgcgacctgggcgccgggctcggcgtc
ggcggccatctgaccgcgctgcggcgcacacgggtgggcccgtacaagctggaccaggca
cgcacgctggagcggattcagcatgcggtggatgacgccgagggcgccgggctgccggtc
atgccgctcggtgaggccgccgctgcggccttcacccgctgggacgtcaccgagccggcc
gcgcgcctgttgctcaacggcgcgcggattccgatgccgcgcttcggtggggacgggccc
gtggcggccttcgggccggacgggacgtttgtggcgctggtggagaatcgcgccgggagg
gcgaggagtcttgctgttttcggctga
DBGET
integrated database retrieval system
