Streptomyces halobius: K9S39_14595
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Entry
K9S39_14595 CDS
T09588
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
shau
Streptomyces halobius
Pathway
shau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K9S39_14595 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shau03400
]
K9S39_14595 (mutM)
Enzymes [BR:
shau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K9S39_14595 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K9S39_14595 (mutM)
DNA repair and recombination proteins [BR:
shau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K9S39_14595 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF7573
DZR
DUF2688
Motif
Other DBs
NCBI-ProteinID:
UQA92900
LinkDB
All DBs
Position
complement(3182086..3183024)
Genome browser
AA seq
312 aa
AA seq
DB search
MPELPEVEVVRRGLERWVSGRTVDAVEVLHPRAIRRHAAGAADFAARLKGLRIGTARRRG
KYLWLPVTGGGPAAQTAAEGIAPIVTPSVTHGLSILAHLGMSGQLLVQPKDAPDEKHLRI
RIRFADALDTELRFVDQRTFGGLSVHDTVPGDPDQLPDVIAHIARDPLDPAFDDAAFHDA
LRRRRTTIKRALLDQSLISGVGNIYADEALWRGKLHYDRPTATFTRPRTAELLGHVRDVM
NAALAVGGTSFDSLYVNVNGESGYFERSLDAYGREDEPCRRCGTPIRRRSWMNRSSYFCP
RCQRPPRPARTG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaggtcgtacgccgtggactggaacgctgggtaagcggc
cgtaccgtcgacgcggtcgaggtcctgcatccgcgcgcgatccgccggcacgccgcagga
gcggccgatttcgcggcccggctcaaggggctgcggataggcacggcccgccgccgcggc
aaatacctctggctcccggtgaccggcggcggcccggcggcccagaccgccgccgagggc
atcgcccccatcgtcacgccgtccgtcacccacggcctgtcgatcctcgcccacctcggc
atgagcggccagctgctggtccagccgaaggacgcccccgacgaaaagcacctgcgcatc
cggatccgcttcgccgacgcgctcgacaccgagctccgcttcgtcgaccagcgcaccttc
ggcggcctctccgtgcacgacaccgtccccggcgaccccgaccagctgcccgacgtcatc
gcgcacatcgcccgcgacccgctggacccggccttcgacgacgccgccttccacgacgcg
ctgcgccgccgccggaccaccatcaagcgggcgctgctcgaccagtcgttgatcagcggc
gtcggcaatatctacgccgacgaggcgctgtggcgcggcaagctccactacgaccgcccg
accgccaccttcacccgcccccgcaccgccgagctgctcggccacgtacgggacgtgatg
aacgcggcgctggccgtcggcggcaccagcttcgacagcctgtacgtcaacgtgaacggc
gaatccgggtacttcgagcgctccctggacgcctacggccgcgaggacgagccctgccgc
cgctgcggcacccccatccgccgccgctcctggatgaaccgctccagctacttctgcccc
cgctgccagcgcccgccacggccggcccggaccggctga
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