Streptomyces halobius: K9S39_18545
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Entry
K9S39_18545 CDS
T09588
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
shau
Streptomyces halobius
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shau03016
]
K9S39_18545 (thpR)
Enzymes [BR:
shau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
K9S39_18545 (thpR)
Transfer RNA biogenesis [BR:
shau03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
K9S39_18545 (thpR)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
RE_Alw26IDE
PDZD8_N
Motif
Other DBs
NCBI-ProteinID:
UQA93584
UniProt:
A0ABY4M9X3
LinkDB
All DBs
Position
complement(4079472..4080050)
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AA seq
192 aa
AA seq
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MRFFAAVLPPRVAIEELAAEVAALRRLSGADRLRWTGRPGWHFTLAFYGEVADELVPELR
LRLERAAHRHHPYEMWIKGGGHFGDRALWAGVAGDREAMRHLAGSAEAAARKAGLVSAGH
AHRPYHPHLTIARGRDRGARAHLAPFAAVLDAFESSGWTVGELALVRSNLPVSGAPGEQP
RYETEAAWPLGR
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgagattcttcgcggcggtgctgccgccccgggtggcgatcgaggaactggccgccgag
gtggcggcgctgcgccggctgtccggcgcggaccggctgcgctggaccgggcggccgggc
tggcacttcaccctggcgttctacggggaggtggcggacgagctggtgccggagctgcgt
ctgcgcctggagcgggccgcgcaccgtcaccatccgtacgagatgtggatcaagggtggc
gggcatttcggtgaccgcgcgctatgggccggggtcgccggggaccgggaggccatgcgg
catctggccgggtcggcggaggccgcggcgcgcaaggccgggctggtcagcgcggggcac
gcgcaccgcccgtaccacccgcatctgaccatcgcccgcggccgtgaccggggggcgcgg
gcccatctcgccccgttcgccgccgtcctcgacgcattcgagagcagcggctggacggtc
ggcgagctggccctcgtccgcagcaatctgccggtctccggcgcgcccggcgagcagccc
cggtacgagacggaggcggcctggccgctgggcaggtga
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