Streptomyces halobius: K9S39_21885
Help
Entry
K9S39_21885 CDS
T09588
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
shau
Streptomyces halobius
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shau03021
]
K9S39_21885
Transcription machinery [BR:
shau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K9S39_21885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
MarR_2
NirdL-like_HTH
HTH_3
HTH_24
DUF7343
HTH_5
DUF134
MarR
NMB0315_dom_I
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
UQA94165
UniProt:
A0ABY4MCN8
LinkDB
All DBs
Position
4794619..4795428
Genome browser
AA seq
269 aa
AA seq
DB search
MTVTARTAPKAPSRESRSADTRALTQVLFAELADLEPGTPEHARVRAALIEANLPLVRYA
AARFRSRNEPMEDVIQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVGEIKRYFRDNVRTV
HVPRRLHELWVQVNGATEDLTVLHGRSPTTAEIAERLKIGEDEVLACLEAGRSYHATSLE
AAQEGDGLPGLLDRLGYEDPELAGVEHRDLVRHLLVQLPEREQRILLLRYYSNLTQSQIS
AELGVSQMHVSRLLSRSFARLRSANRIDA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtgacggcccgtactgcgcccaaggctccgtcccgcgagagccgaagcgcggac
acgcgggcactcacccaggtgctgttcgcggagctggcggacctggaacccggcactccc
gagcacgcccgggtccgtgccgcgctgatcgaggccaatctgccgctggtgcgctacgcc
gccgcccgttttcgcagtcgcaacgaaccgatggaagacgtcatccaggtcggcaccatc
ggcctgatcaacgccatcgaccggttcgaccccgaccgcggcgtccagttcccgaccttc
gcgatgccgaccgtcgtcggcgagatcaagcgctactttcgcgacaatgtccgcaccgtt
cacgtcccgcgccgcctccacgaactgtgggtgcaagtcaacggcgcgaccgaggatctg
acggtgctgcacggccggtcgcccaccaccgccgagatcgccgagcggctcaagatcggc
gaggacgaggtcctggcctgcctggaggccggccgttcgtaccacgcgacgtccctggag
gccgcccaggagggcgacggtctgccgggcctcctggaccggctcggatacgaggatccg
gaactggccggcgtcgagcaccgcgacctcgtccggcatctcctcgtccagctgcccgag
cgcgaacagcgcatccttctcctgcgctactacagcaacttgacgcagtcccagatcagc
gcggagctgggagtatcgcagatgcatgtgtcacgtctgctgtcgcgcagcttcgccaga
ttgagatccgcaaacaggatcgacgcctaa
DBGET
integrated database retrieval system
