Streptomyces halobius: K9S39_21985
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Entry
K9S39_21985 CDS
T09588
Name
(GenBank) PAS domain-containing protein
Organism
shau
Streptomyces halobius
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Response_reg
HisKA
PAS_7
Motif
Other DBs
NCBI-ProteinID:
UQA94181
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All DBs
Position
4813568..4818136
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AA seq
1522 aa
AA seq
DB search
MSSRPSRGAARLAAILDALPDALLLVNCNGTVVNANTIALETFEAPGTALVGRGLLDLLP
SFDSKRIPGSMRRRDDETEGGRTKPTRMVARRTDGTELLVEVTSANLEDGRTPYESAFEA
AYADHRNGYTGDELLMLVVRDLTGTLDTETELARQQRQTEMILRAAAEGVVGVDAEGKVV
LVNPSAAQILGYRASELGGKELHPLIHHSRADGSPLPWEDTPLADTLKSGRKHRVRGQAL
WAKDGRAVAVDLTTAPVRDGDQLVGAVMTFTDRRPFDALAARHTQLLAVLEQALRGPLEE
LKGELGTLASDPAGQLWPEANQILHHLAAGHARMTTLVDNVLSYQRLDSGKDRLNRAKVS
LDAVVAAGVEGAIELIGPGRAQFAVHAPPIEATVDAERLAQALSHLIADVAGVDSTGRMQ
VGDGGTGPGGRPGPVPGDSTIVVAAAKRGDVVRIEVRGPYGGGDPVHEPIVRGIMRQHGG
LMQTHEVPGAPGAGGSAYVLELPVSPDAAAATAADRAPGANGNETTVMPVPAARARGTQP
GGAEAGAGADSGTGTDGRNDGLGQGGETGGGGATGSTGAAGSSGDGAAGSGGASGDGDRT
GQHGAGVDGGTAVPAQGGGAPQQSTGRRRARHSGPEQGAGTDPRTLGADHGPQNLRAVNP
AGRGGEVATGAQAGGAQAGGAQACVPHGAGGEGPQGDAASGTGDGAPGAHHHGAATGGSD
GAGLPGADGAGLPPGRAGGEAVPPTGRRRARQGAPEGGALPALPSGPDTLSSGADALPGA
DHANDAVERAQQGAGGAPAAGPASAAGQPQGLGPVQPQGQGPVQPQGLGPVQPQGRGPGQ
PQGLGPVQPSGRRARRALAEAPERAQSSPSAAANGAASAQQQPQPSDPRSADALSPAGAR
TAFALPPAAADQTPQSLPALPASAGQAPAQAAGQVPAQAAGQLPTQATGQAPAQAAQLPK
QATGPQDGAGTGRRRASRPGRRRPAGAPGAQPGHELEAANTTAPQGDWDAEPTGRRRARR
AAAEERAAAAMADSEASGTFVAGPEGLVAQPTEPGAETGTATGTAAGIAPVADRTAPTAP
APTGRRRGRPSPAEEPAGGQAVAPVPPQGHATAAQRQPLPAEDDSRHPAGHSHGRAFSVR
TLGQGVPFAQQLADQQRPAAPPGSRPPGGTSAGSGRRRKLATPPQDGERAAAEAAAPAEA
RPHPAPQAGAQPDRPAPQPQPQPAAPAQPQPQPQPHLMDASEGRAFAISAPDEGSEGPEP
LDGPNGAIEVMSRQPLPMDDELPPEPLDNPRRLLVWPAPDVSTQQALSDRGYRPVIVNSR
EEVDAQIAAYPAALFVDPLTGPITRTALQSLRQAAGAAEVPVLVTAGLAQASREAAYGAD
PAVLLKALAPRDSEQHPPRVLLIEQNDAIAGALTTSLERRGMHVARADADTDAVTLATQM
RPNLVVMDLMQVRRRRVGIVDWLRANGLLDRTPLVVYTYADMDPAQLPLLAAGETVLFLA
ERSTSTEVQARIVDLLAKIGTN
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcccgaggcgctgctcgcctcgcagccatactcgacgccctcccc
gacgcgctgttgctcgtcaactgcaacggcacggtcgtcaacgccaacaccatcgcgctg
gagaccttcgaggcgccgggcaccgccctggtgggccgcggtctgctggacctgctgccg
tccttcgactccaagcgcatccccgggtccatgcggcgccgggacgacgagaccgagggc
ggccgtacgaagccgacgcggatggtcgcgcggcgcaccgacgggaccgagctgctggtc
gaggtgaccagcgccaacctggaggacgggcgcaccccgtacgagagcgccttcgaggcc
gcgtacgccgaccaccgcaacggctataccggcgatgagctgctgatgctcgtcgtccgc
gatctgaccgggacgctggacaccgagaccgagctggcccgccagcagcggcagaccgag
atgattctgcgggccgcggccgagggtgtggtcggggtcgacgccgagggcaaggtcgtg
ctggtcaatccgtccgcggcgcagatcctgggctaccgggcgagtgagctgggcggcaag
gagctgcatccgctgatccaccactcccgggcggacggttcgccgctgccgtgggaggac
accccgctcgccgacaccctgaagtccgggcgcaagcaccgggtgcgcgggcaggcgctg
tgggcgaaggacgggcgtgcggtggccgtcgatctgacgacggcgccggtgcgggacggt
gatcagctcgtcggagcagtgatgacgttcaccgaccggcgtcccttcgacgcgctggcg
gcgcggcacacgcagctgctggccgtgctggagcaggcgctgcgcgggccgctggaggag
ctgaagggcgagctgggcacgctcgcctccgacccggcggggcagctgtggcccgaggcg
aaccagatcctgcaccatctggccgccggccacgcccggatgacgacgctggtggacaac
gtcctgagctatcagcggctggactccgggaaggaccggctcaaccgggccaaggtctcg
ctggacgccgtcgtcgcggcgggtgtggagggcgcgatcgagctgatcggccccggccgg
gcgcagttcgcggtgcacgcgccgccgatagaggccacagtcgatgccgagcggctcgcg
caggcgctgtcgcatctgatcgcggatgtcgcgggtgtggactccacgggacggatgcag
gtcggcgacggcggtacggggccgggcgggcggccggggccggttcccggggactcgacg
atcgtggtcgcggcggcgaagcgcggtgacgtcgtacggatcgaggtgcgcggcccgtac
ggcggcggcgacccggtccatgagcccatcgtgcgcgggatcatgcggcagcacggcggc
ctgatgcagacgcacgaggtgccgggcgcgccgggcgcgggcggcagcgcgtatgtgctg
gagctgccggtttcaccggatgccgcggcggcgaccgcggcggaccgggcgcccggggcg
aacggcaatgagacgacggtgatgccggtaccggctgcgcgggcgcgggggacacagccc
ggcggggccgaggccggcgcgggcgcggattcgggtacgggtacggacggccgtaacgac
ggtctggggcagggcggcgaaaccggtggcggtggtgccaccggttccactggtgccgct
ggttccagtggtgatggtgccgctggctccggtggtgcctcgggggatggtgaccgtacg
gggcagcacggggcgggtgttgacggtggtacggcagtgccggcccagggcggcggtgcg
ccgcagcagtcgaccggccgtcggcgcgcgcggcactccggtccggagcagggcgcgggg
acggatccgcgcacgctcggcgccgaccacggcccgcagaatctgcgagcggtgaacccg
gcgggccgcggcggggaggtcgccaccggtgcacaggccggtggtgcacaggccggtggt
gcacaggcctgtgttccgcatggcgccggtggcgagggcccacagggcgacgcggcctcc
ggaacgggcgacggcgccccgggggcgcaccatcacggcgctgccacgggcgggtccgac
ggcgccgggctgccgggcgcggacggtgcggggctgccgcccggcagggcgggcggcgag
gccgtaccgccgaccgggcggcgacgggcccggcagggggccccggagggcggggcgctg
cccgcgctcccctccggtccggacacgctctcctccggtgcggacgcgctccccggtgcg
gaccatgcgaacgatgccgtcgagcgcgcgcagcagggcgctggaggggcaccggcggcc
ggtccggcgtctgctgcggggcagccgcaggggctcggcccggtgcaaccgcagggccaa
gggccggtgcagccccaggggttgggaccggtacagccgcagggccgaggaccgggacag
ccccaggggctcggaccggtgcagccgagtggtcggcgcgcgcgccgggcgctggccgag
gcgccggagcgggcccagtcgtccccgtccgccgccgcgaacggggccgcctccgcgcaa
cagcagccacagccttcggacccccggtccgcggacgcgctgtcgcccgccggcgcacgc
accgccttcgcactgccgcccgccgcggcggaccagacgccgcagtcgctgccggccctc
cccgcgtccgccggtcaggcgcccgcacaggcagctggccaggtacccgcacaggccgcc
ggtcagctgcccacgcaagcaaccggtcaggcgcccgcacaggccgctcagctgcccaag
caagcaaccggtccgcaggacggggccggcacgggccgtcgccgggcatcgcgtccgggc
cgccggcgaccggccggcgcgcccggcgcacaaccgggacacgaactggaagcggccaac
accaccgccccgcaaggcgattgggatgccgagccgaccggcaggcgacgggcccggcgg
gccgcggccgaggagcgggcggcggccgcgatggccgattccgaggcgtccggcaccttc
gtggcgggcccggaggggcttgtcgcgcaaccgaccgagcccggcgcggagaccggcacg
gcgacgggcacggcagccgggatcgcgccggtggcggaccgtaccgcgccgaccgcgccc
gccccgacggggcgtcgacgcgggcgccccagccccgccgaggagcccgcaggcggccag
gccgtggcccccgtgccgccgcagggccacgcgaccgccgcccagcggcagccgctgccc
gccgaggacgacagccgtcacccggccgggcactcccacggccgggcgttcagcgtgcgc
acgctcgggcagggcgtgccgttcgcccagcagctcgccgaccagcagcgcccggcggca
ccccccggcagcaggcctccgggtggcacgtccgccggttcggggcgccgccgcaagctc
gccacacctccgcaggacggtgagcgcgccgccgcggaggccgcggctccggccgaggcg
cgcccgcaccccgcgccccaggccggggcgcagccggaccggcccgcgcctcagccgcag
ccccagcccgcggccccggcgcagccacagccccagccccagccacatctgatggacgcc
tccgagggccgcgccttcgcgatctccgcgcccgacgagggcagcgagggcccagagccg
ctggacggccccaacggcgcgatagaggtgatgtcccgtcagccgctgccgatggacgac
gagctgccgccggagccgctcgacaacccgcgtcggctgctggtctggccggcgccggac
gtctccacccagcaggcgctgagcgaccgcggctaccgcccggtgatcgtcaactcccgc
gaggaggtggacgcgcagatcgcggcgtaccccgcggcgctgttcgtcgacccgctgacc
gggccgatcacacgcaccgcgctgcagtcgctgcgccaggcggcgggtgcggccgaggtc
ccggtgctggtgacggccggtctggcgcaggcctcccgggaggcggcgtacggagccgac
ccggccgtgctcctcaaggcgctggcaccgcgcgacagcgaacagcacccgccacgggtg
ctgctgatcgagcagaacgacgccatcgcgggcgccctgaccacgtcgctggagcggcgc
gggatgcatgtcgcacgggccgatgcggacaccgacgcggtcaccctcgcgacgcagatg
cggcccaacctggtcgtcatggacctgatgcaggtacgccgcaggcgcgtcggcatcgtc
gactggctgcgcgccaacgggctgctcgaccgcaccccgctggtcgtctacacctacgcc
gacatggacccggcccaactgccgctgctcgctgcgggcgagaccgtactcttcctcgcg
gaacgctccacgagcaccgaggtgcaggcccggatcgtcgacctgctcgccaagatcggc
acgaactga
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