Streptomyces halobius: K9S39_24345
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Entry
K9S39_24345 CDS
T09588
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
shau
Streptomyces halobius
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GFIT
Motif
Pfam:
NPCBM
Sigma70_r2
Sigma70_r4_2
zf-HC2
Motif
Other DBs
NCBI-ProteinID:
UQA94570
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Position
complement(5332870..5334825)
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AA seq
651 aa
AA seq
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MGVDGRDEQRGGETGAGAGRPEGAPPEQVPGQTGPLGATPPVSGAAERHDRAEAPESHSV
PPQRTRSGEAGPAAVGPVLHTDAEPAKPPPSDGQLIAAMRAGDDSAYEEMYRRHAAAVRR
YARSCCRDTHTAEDLTGEVFARTLQAVRGGAGPDSAVRAYLLTTVRRVAAAWAQTTKREQ
LVEDFAVFAVSAAGASMDDDTLGLGADVRAMHEAEQSMAVQAFRSLPERYQTVLWHTTIE
DESPSEVAPLLGLTANATAVLAHRAREGLKQAYLQAHVSQSLTAGGDCARYADRLGAYAR
GGLRMRAERGLRKHLDACGRCRTAALEVADVNQRIGAVLPVAVIGWFAAGYAVKVAAVGA
AGVGAATGAGAAAAAGGSGSGAAGSAGGAAASEGLGAPVKVGVGVGMVAAAGVALTLVLI
GTPKPAPHTEAQPHRPAPSAPSAPRKPSPKPPPPTPKPSAPAAAAHQPEPKPTPTPTPKP
PPPTPTPTPTPTPSSPRPTPKPPPPPAPTPYRVNALDYDFAGDGTKPEVRAVGSSWMWQR
QRPRIDGTAYRHGVSVHPSSSVLIDLNRTCTAYDALVGVDDLSLGLGALRFSVYGDGERL
WRSDVVRGGDPAVPVHVPLTGRKTLRLVVEPETPLGGLGPGDWAESQISCR
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttgacgggcgggacgagcagcgcggcggcgagaccggtgccggcgcggggcgg
cccgagggcgcgccgccggagcaggttcccggccagaccggaccgttgggggcgactccc
ccggtgagcggtgccgccgagcggcacgaccgagccgaggccccggagagccacagtgtg
ccgccccagcgcacgcgctccggcgaggccgggccggcagcagtcggtcccgtactgcac
accgacgccgagcccgcaaaacccccgccctccgacggccagttgatcgccgccatgcgg
gccggcgacgacagcgcgtacgaggagatgtaccgcaggcacgccgcggccgtacggcgc
tacgcacgcagctgctgccgggacacgcacaccgcggaggacctgaccggcgaggtcttc
gcccgtacgctgcaggcggtacgcggcggcgcggggcccgattccgcggtccgcgcctac
ctcctgaccacggtccgccgggtcgccgcggcctgggcgcaaaccacgaaacgggagcag
ctggtcgaggacttcgcggtgttcgcggtgtcggcggccggtgcgtcgatggacgacgac
acgctgggcctgggcgcggatgtccgcgccatgcacgaggccgagcagtccatggccgtg
caggccttccgcagcctgcccgagcgctatcagacggtgctgtggcacaccaccatcgag
gacgagtcgccgagcgaggtcgccccgttgctcgggctgaccgccaacgccaccgccgtc
ctggcgcaccgcgcccgtgagggtctcaagcaggcgtatctgcaagcgcatgtgagccag
tcgctgaccgccggcggcgactgcgcacggtacgccgaccggctcggcgcgtatgcccgc
ggcgggctgcggatgcgggccgagcgggggctgcgcaagcatctcgacgcatgcggccgg
tgccgtacggccgcgctggaggtcgcggacgtcaaccagcggatcggtgcggtgctgccg
gtcgctgtcatcggctggttcgccgccgggtacgccgtcaaggttgccgcggtcggcgcc
gcgggcgtgggggcggcgacgggggccggggcggccgcggccgccggaggttccggttcc
ggtgcggccgggagcgcgggcggggccgccgcgagcgagggtctcggcgcgccggtcaag
gtcggtgtcggggtcgggatggtggcggcggcgggtgtggcgctcacgctggtgctgatc
ggcacccccaaaccggcaccgcatacggaggcccagccgcaccggccggccccctcggcc
ccgtcggcgccccggaagccgtcgcccaaacccccgccgcccacgccgaaaccgtcggcg
ccagcggcggccgcgcaccagccggagccgaagccgacacccacgccgaccccgaagccg
cccccgcccacgccgacgccgacccccacaccgacgccctcctcgcccaggcccaccccg
aagccgcctcccccgccggccccgaccccgtaccgggtcaacgcgctggactacgacttc
gcgggcgacggcacgaagccggaggtgcgcgcggtgggcagcagctggatgtggcagcgg
cagcggccgcgcatcgacggcacggcataccggcacggcgtgagcgtgcacccgtcgtcc
tcggtgctcatcgacctcaaccggacgtgcaccgcctacgacgctctcgtgggcgtcgac
gatctgagcctggggctgggcgcgctgcgcttctccgtctacggggacggggaacggctg
tggcggtcggacgtggtgcgcggcggggatccggcggtgccggtgcatgtcccgctgacg
ggccgtaagacactgcggctggtggtcgagccggagacgccgctgggtgggctggggccg
ggggactgggcggagtcgcagatcagttgccgctga
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