Streptomyces halobius: K9S39_25225
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Entry
K9S39_25225 CDS
T09588
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
shau
Streptomyces halobius
Pathway
shau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K9S39_25225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shau03021
]
K9S39_25225
03400 DNA repair and recombination proteins [BR:
shau03400
]
K9S39_25225
Enzymes [BR:
shau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K9S39_25225
Transcription machinery [BR:
shau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K9S39_25225
DNA repair and recombination proteins [BR:
shau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K9S39_25225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UQA94717
LinkDB
All DBs
Position
5511450..5512472
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctctctgaccgaagaggtcgtcgacgaataccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactctctgcgtcgg
accctcctgtcgtcgatccccggtgcggctgtcaccagcattcgcatcgacggcgttctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctcatcctcaacatc
aagcagctggtcgtgagcagcgagcacgacgagcccgtggtgatgtacctgcgcaagcag
ggtccgggcctggtgaccgccgccgacatcgcgccgccggccggtgtcgaggtgcacaac
ccggacctggtcctcgccacgctgaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctatgtctccgccgtccagaacaagcaggtgggccaggagatcggc
cggatcccggtcgactccatctactccccggtgctcaaggtcacgtacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgtccgcgtgacgccatggcgtcggccggtaagaccctggtcgagctgttcggt
ctggcgcgtgagctcaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgccctggccgccgacctggcgctgccgatcgaggagctggagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactcggtgggcgagctggtggcccgctccgag
gcggacctgctcgacatccgtaacttcggtgcgaagtcgatcgacgaggtgaaggcgaag
ctggccgggatggggctcgctctgaaggactcgcctcctggattcgacccgaccgccgcc
gccgacgccttcggcgccgacgacgacgcggacgccgggttcgtcgagaccgagcagtac
tga
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