Streptomyces halobius: K9S39_25715
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Entry
K9S39_25715 CDS
T09588
Name
(GenBank) serine hydrolase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
shau
Streptomyces halobius
Pathway
shau00550
Peptidoglycan biosynthesis
shau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K9S39_25715
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shau01002
]
K9S39_25715
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shau01011
]
K9S39_25715
Enzymes [BR:
shau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K9S39_25715
Peptidases and inhibitors [BR:
shau01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
K9S39_25715
Peptidoglycan biosynthesis and degradation proteins [BR:
shau01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
K9S39_25715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
DUF3834
Motif
Other DBs
NCBI-ProteinID:
UQA94804
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Position
5625036..5627705
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AA seq
889 aa
AA seq
DB search
MAGESPDKSDKKQSSGETAGGERDPRLTVFRENPEETAEAEKSAGTGKSAGTGKSAKAGR
PVKPEKSAEVEKPARAEKSAEADTPGKSEKTEKSAESKKAGAPEGDVSADATSKDAVAEG
AFSKGDGSAAGVDGRSGEESEAPQEDAPDGESADGDSGDGDDRLRTAVAAWVGRVDGEGG
EGDAQGGGRRAEADADADAGESARSGTDGDGGAEVKAEAEPKTEPGAESKAAPATDGEAD
ADEPPVDNATRVFAIGKLKGDIAADPPVDQPTTAFKITPPGEGTPKGEREGDAKSESDAK
GKDEAKGDTGKTGAKGDSKGDAEKDAEQDAGKDAKKAPASGSSAAAERDTERTSQFVALK
SADDGAAERSLGKTASQVPTPGVAPARRPDKAPRTPLPAESAKPSAPAKSGTPSGPPPTA
ASATGETAAAGATAPDRTEEQPPAESGALPESERTRQEPLPPLDLLAQLTNTPPPPETPL
RTIIRRFKIWTPLVVLLAIIFVIVQAVRPLPAPELAVGSSTAFTFEGGKLAMPWPDRGQA
AAGVVGVGSMGTSGAQKPVPTASVAKVMTAYVILRDHPLKKGAKGETITVDAQAEADSKK
KDESRVPLKKDQQFTQYQMLQMLMIPSGNNAARLLARWDAGSEEAFVKKMNAAAKKLGMT
KTTYTDPSGLDKSTVSTAVDQLKLAEEVMKNDAFREVVRTENVQIEGLPEKIYNNNSLLT
TMAGKVAGIKTGSSTPAGGAFMWAGYRTVGGKDQLLLGVTMDQRANSTDPNAHLSVALEN
SAKVINAARDALVSATVVKKGQVVGYVDDRLGGRTPVVATKNLTAVGWAGMKAAFSISDG
GKAVPHEAKAGTKVGVLTVGKGESARKVPVALQKDLTDPTFGARLTRLG
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
gtggcgggcgagtcccccgacaagtcggacaagaagcagtcgtcgggggagacggcgggg
ggcgaacgtgatccgcgcctgaccgtcttccgtgaaaatccggaggaaacggccgaggcg
gagaagtcggcggggaccgggaagtcggcggggaccgggaagtcggcgaaggctggtagg
ccggtgaagccggagaagtcggccgaggtggagaagcctgcccgggcggagaagtcggcc
gaggcggatacgcccgggaagtcggagaaaacggagaaatcggcggagtcgaagaaggcc
ggtgctccggagggcgacgtttcggcggacgccacctcgaaggacgccgttgcggagggt
gccttttcgaagggtgacggttctgctgccggggtcgatgggcggtccggggaggagtcc
gaggcaccccaggaggacgctccggacggtgagagtgccgatggcgactccggggacggt
gacgaccgtctgcggaccgctgtggccgcttgggtcggtcgtgtggacggtgagggcggc
gagggggacgctcagggcggcggccggcgtgcggaggcggacgcggacgcggacgccggc
gagagtgcgcgttcgggtacggacggtgatggtggggcggaggtgaaggccgaggctgag
ccgaagacggagccgggggccgagtcgaaggctgcgcctgccactgacggtgaggccgac
gccgacgagccaccggtcgataacgcgacgcgtgtgtttgccatcgggaagctgaagggg
gacatcgcggcggatccgcccgtcgaccagcccaccacggccttcaagatcaccccgcct
ggcgagggcacgcccaagggggagagagagggcgacgctaagagcgagagcgacgccaag
ggcaaggacgaggccaagggcgacaccggcaagaccggcgccaagggcgacagcaagggc
gacgccgaaaaggacgccgagcaggacgccgggaaggacgccaagaaggccccggcctcc
ggctcctccgccgccgccgagcgtgacaccgagcggaccagccagttcgtggcgctgaag
tccgccgacgacggtgctgcggagaggtcgctgggcaagacggcgagccaggtgcccaca
cccggcgtggcgccggcccgtagacccgacaaggcgccccgtacgccgctccccgccgag
tccgcgaagccgtccgcgcctgcaaagtccggcaccccgtccggccctccgcccaccgcc
gcgtccgccaccggggagaccgccgctgctggggccaccgcgcccgaccggaccgaggag
cagccgccggccgagtccggcgcactgcccgagtccgaacggacccggcaggagccgctg
cctccgctcgacctgctggcgcagctcaccaacaccccgccgccgcccgagaccccgctg
cggacgatcatccgccggttcaagatctggaccccgctggtggtgctgctggcgatcatc
tttgtgatcgtccaggcggtgcggccgctgcccgccccggagctcgccgtcggttcgtcg
accgcgttcaccttcgagggcggcaagctcgccatgccgtggcccgaccggggccaggcc
gctgccggggtcgtcggcgtcggcagcatgggcacgtccggtgcgcagaagccggtgccg
accgcgagcgtcgccaaggtgatgaccgcgtatgtgatcctccgcgaccacccgctcaag
aagggcgcgaagggcgagacgatcaccgtcgacgcgcaggccgaggcggattcgaagaag
aaggacgagtcgcgcgtcccgctcaagaaggatcagcagttcacgcagtaccagatgctg
cagatgctgatgatcccgtcgggcaacaacgcggcgcgcttgctcgcccgttgggacgcc
ggctccgaggaggcgttcgtgaagaagatgaacgccgccgccaagaagctcgggatgacc
aagacgacgtacaccgaccccagcggcctggacaagtcgaccgtgagcaccgccgtcgat
cagctcaagctcgccgaggaggtcatgaagaacgacgcgttccgcgaggtcgtacgcacc
gagaacgtgcagatcgagggtctgccggagaagatttacaacaacaacagcctgctcacg
acgatggcgggcaaggtcgccggcatcaagaccggttcgagcacgccggccggcggcgcg
ttcatgtgggccggctaccgcaccgtcggcggcaaggaccagctgctgctcggtgtgacg
atggatcagcgtgccaacagcacggaccccaacgcgcatctctcggtcgccctggagaac
agcgcgaaggtgatcaatgcggcccgggacgcgctggtctcggccaccgtcgtgaagaag
ggccaggtcgtcggctatgtcgacgacaggctcggcggccggacgccggtcgtggcgacc
aagaacctcacggcggtcggctgggccggcatgaaggcggccttctccatcagtgacggc
ggcaaggccgttccgcacgaggcgaaggccggcaccaaggtcggcgtgctgacggtcggc
aagggtgagagcgcgcggaaggtgccggtcgcgctccagaaggacctgaccgatccgacg
ttcggagccaggctgacgcgcctcggatga
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