Streptomyces halobius: K9S39_25750
Help
Entry
K9S39_25750 CDS
T09588
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
shau
Streptomyces halobius
Pathway
shau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K9S39_25750 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shau03019
]
K9S39_25750 (recQ)
03400 DNA repair and recombination proteins [BR:
shau03400
]
K9S39_25750 (recQ)
Enzymes [BR:
shau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K9S39_25750 (recQ)
Messenger RNA biogenesis [BR:
shau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K9S39_25750 (recQ)
DNA repair and recombination proteins [BR:
shau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K9S39_25750 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
UQA97933
LinkDB
All DBs
Position
complement(5633423..5635444)
Genome browser
AA seq
673 aa
AA seq
DB search
MGLGPGRGTGTESASGGVGEAVQVLRRVFGYDAFRGSQQEIIEHVIGGGDAVVLMPTGGG
KSLCYQIPALVRSGVGVVISPLIALMQDQVDALRALGVRAGFLNSTQDFEERRLVEAEFL
AGELDLLYLAPERLRVEQTLSLLDRGKVALFAIDEAHCVAQWGHDFRPDYLALSMLHERW
PDVPRIALTATATEATHDEITSRLRMADARHFVASFDRPNIQYRIAAKSEPKKQLLELLR
GEHAGDAGIVYCLSRASVEKTAQFLVQNGIDALPYHAGLDARTRAAHQARFLREDGLVMV
ATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKM
IDGSEGDDAHRRRLSAHLDAMLALCETVQCRRVRLLAYFGQKSESEACGNCDTCLTPPRT
WDGTVAAQKLLSTVVRLQRERGQKFGAGQIIDILMGRKTAKVIQFDHDGLSVFGIGDDLR
EAEWRGVVRQLLAQGLLAVEGDYGTLVLTAASGDVLRGRREVPMRREPEKAAKAAKGART
AKGKQAPVDLSEEALPVFEALRAWRGRTAKEQGVPAYVIFHDATLREIATARPATTAALG
TVNGVGENKLAKYGQQILDVLAGREGDAEAGAGAGAEAGVGAGAPAAMVMGAVEDDQRAP
EPPDDIEPDDIDW
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgggtctggggccggggcgcggtaccgggacggagagcgcgtcgggcggtgtgggcgag
gcggtgcaggtgctgcgccgggtgttcgggtacgacgcgttccgcggcagtcagcaggag
atcatcgagcacgtcatagggggcggggacgcggtcgtcctgatgccgaccggtggtggt
aagtcgctctgctatcagatcccggccttggtgcgcagtggcgtgggtgtggtgatctcg
ccgctcatcgcgctgatgcaggaccaggtcgacgcgttgcgggcgctgggtgtgcgagcc
gggttcctcaactccacgcaggatttcgaggagcggcggctggtggaggccgagtttctc
gccggggagctggatctgctgtatctggcgcccgagcggctgcgggtggagcagacgctg
agcctgctggaccgggggaaggtcgcactcttcgcgatcgatgaggcgcactgtgtcgcc
cagtggggccatgacttccggccggactatctggcgctgtcgatgctgcacgagcgctgg
cccgatgtgccgcggatcgcgctgaccgccaccgcgaccgaggccacgcatgatgagatc
acctcacggctgcggatggcggacgcccggcatttcgtggcgagcttcgaccgccccaac
atccagtaccggatcgcggccaagagcgagccgaagaagcagttgctggaactgctgcgc
ggcgagcacgccggggacgcggggatcgtgtactgcctctcgcgtgcgtcggtggagaag
accgcccagttcctggtgcagaacgggatcgacgcgctgccgtatcacgccggcctcgac
gcccgtacgcgcgccgcgcaccaggcccggttcctgcgggaggacggcctggtcatggtc
gccacgatcgcgttcgggatggggatcgacaagccggatgtgcggttcgtagcgcatctg
gacctgccgaagtcggtggagggttactaccaggagacggggcgtgccgggcgggacggg
ctgccgtcgacggcctggctggcctatgggctgcaggatgtggtgcagcagcggaagatg
atcgacgggtcggagggggacgacgcgcatcggcggcggttgtccgcccatctggacgcc
atgctcgcgctgtgcgagacggtgcagtgccgtcgggtgcggctgctggcgtacttcggg
cagaagagcgagagcgaggcgtgcggcaactgcgatacgtgcctgacgccgccgcggacg
tgggatggcacggtcgccgcacagaagctgctgtcgacggtggtgcggttgcagcgcgag
cgggggcagaagttcggggcgggccagatcatcgacattttgatgggccggaagaccgcc
aaggtgattcagttcgatcatgacgggctgagtgtcttcgggatcggcgatgatctgcgg
gaggccgaatggcggggtgtggtacggcagttgctcgcgcaggggctgctggccgtcgag
ggtgattacggcacgctggtactcacggcggcgagcggcgatgtactgcgcggccggcgc
gaggtgccgatgcggcgggagccggagaaggccgcgaaggcggcgaagggcgcgcggacg
gcgaagggcaagcaggcgccggtggatctgtccgaggaagcgctgccggtgttcgaggcg
ctgcgggcctggcggggccgtacggccaaggagcagggcgtccccgcgtatgtgatcttc
catgacgcgacgctgcgcgagatcgccacggcccggccggcgaccacggccgcgctgggg
acggtcaacggggtcggcgagaacaagctcgcgaagtacgggcagcagatcctggatgtg
ctggcgggtcgggagggggacgcggaagcgggagcaggcgcaggagcggaagccggtgtg
ggagcaggagcgccggcggcgatggtgatgggggcggttgaggacgatcagcgtgctccg
gagccgccggatgacattgagccggacgatatcgactggtga
DBGET
integrated database retrieval system
