Streptomyces halobius: K9S39_32770
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Entry
K9S39_32770 CDS
T09588
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
shau
Streptomyces halobius
Pathway
shau03030
DNA replication
shau03430
Mismatch repair
shau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K9S39_32770 (dnaE)
03430 Mismatch repair
K9S39_32770 (dnaE)
03440 Homologous recombination
K9S39_32770 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shau03032
]
K9S39_32770 (dnaE)
03400 DNA repair and recombination proteins [BR:
shau03400
]
K9S39_32770 (dnaE)
Enzymes [BR:
shau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K9S39_32770 (dnaE)
DNA replication proteins [BR:
shau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K9S39_32770 (dnaE)
DNA repair and recombination proteins [BR:
shau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K9S39_32770 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
UQA96016
LinkDB
All DBs
Position
7193335..7196877
Genome browser
AA seq
1180 aa
AA seq
DB search
MAKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFFSAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANQTGLHNLFRL
SSDAYAEGWLQKWPRMDKETLAQWSEGLIASTGCPSGELQTRLRLGQFDEALKSASEYQD
IFGKDRYFLELMDHGIEIERRVRDGLLEIGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTEEMYAIDSSDAWQEGCANTRLVAEQIDVTGMFEKRD
LMPKFDIPEGYTEVTWFQEEVRVGMKRRYPGGVPEDRQKQAEYEMDVIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIEHGLIFERFLNPERLSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLDGITNPEHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSETITDHAPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVEA
NKGTKLELLDVPLDDPKTYEMLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHTNYAERKNGRQEITPIHPELEEPLRETLGLTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELEKNFGIFQAGARKNGYSDEAIQALWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANYPAEYMSALLTSVRDDKDKSAVYLNECRRMGIRVLPPNVNES
EANFAAQGDDVILFGLTAVRNVGQNVVDSIIRCRKAKGKYASFPDYLDKVDAVVCNKRTT
ESLIKAGAFDEMGHTRKGLTAHYESMIDNVVQVKRKEAEGQFDLFGGMGDDSADEGPGFG
LDIEFSDVEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAAIAQLTGGDYADGSI
VTIGGIISGLQRKMTKQGNAWAIATVEDLAGSIDCMFFPATYQLVSTQLVEDTVVFVKGR
LDKREDVPRLVAMEMMVPDLSEAGTNAPVTITIPTVKVTPPMVEKLGEVLSSHRGSTEVR
IKLQGARKTTVLRLDRHRVTPDPSLFGDLKVLLGPSCLAG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaagccgcccttcacccacctgcacgtccacacccagtactcgctgctggacggt
gcggcgcggctgaaggacatgttcaacgcgtgcaacgagatgggcatgacgcatatcgcc
atgtccgatcacggcaacctccatggtgcgtacgacttcttcttctccgcgaagaaggcg
ggggtgacgccgatcatcgggatcgaggcgtatgtcgccccggagtcgcggcgcaacaag
cgcaagatccagtggggtcagccgcatcagaagcgcgacgatgtgtccggttcgggtggt
tacacgcataaaacgatctgggcggcgaaccagaccggtctgcacaacctcttccggttg
tcctcggacgcgtacgccgagggctggctgcagaagtggccccggatggacaaggagacc
ctcgcccagtggtccgagggtctgatcgcgtccaccggctgtccttcgggggagctccag
acccggttgcgcctcggccagttcgacgaggccctgaagtcggcctccgagtaccaggac
atcttcggcaaggaccgctacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacggcctgctggagatcggcaagaagctcggcatcccgccgctggtgacc
aacgactcgcactacacctacgcgcacgaggcgaccgcccacgacgcgctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttccgcttcgacggcaccggctactac
ctgaagtccacggaggagatgtacgccatcgactcctcggacgcctggcaggagggctgc
gccaacacccgcctggtcgccgagcagatcgacgtcacggggatgttcgagaagcgcgac
ctgatgccgaagttcgacatccccgagggctacaccgaagtcacctggttccaggaggag
gtccgggtcggcatgaagcgccgctacccgggcggcgtccccgaagaccggcagaagcag
gccgagtacgagatggacgtcatcatccagatggggttcccgggctacttcctggtggtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtggggccggggcgtggctcc
gcggccggttcgatcgtcgcctacgcgatgggcatcaccgacctcgacccgatcgaacac
gggctgatcttcgagcggttcctcaatcccgagcgcctctcgatgcccgatgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtcatccggtatgtcacggagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggcgaccgcctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctcgacggcatcaccaaccccgagcacccgcgc
tactccgaggcgggcgagatccgggggatgtacgagaacgaaccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggtgtgcacgcggccggc
gtgatcatgtccagcgagaccatcaccgatcacgccccggtctgggtccggcacaccgac
ggcgtgacgatcacgcagtgggactaccccagctgtgagtcgctcggcctgctgaagatg
gacttcctgggcctgcggaacctcaccatcatggacgacgccgtcaagatggtggaggcc
aacaagggcaccaagctggagctccttgacgtcccgctcgacgaccccaagacgtacgag
atgctctgccgcggtgacacgctcggcgtcttccagttcgacggcggtccgatgcggtcg
ctgctgcgccagatgcaacccgacaacttcgaggacatttccgccgtttcggccctctac
cggccgggcccgatgggcatgaactcgcacacgaactacgcggagcgcaagaacggccgc
caggagatcaccccgatccacccggagctggaggagccgctcagggagaccctcggcctc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggt
tactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgaggag
ctggagaagaacttcggcatcttccaggcgggcgcccggaagaacggctattccgacgag
gcgatccaggccctgtgggacgtcctggtcccgttcgccggctacgccttcaacaaggcg
cactcctcggcgtacggcctggtcacgtactggaccgcgtacctcaaggcgaactacccg
gccgagtacatgtcggcgctgctgacctcggtgcgggacgacaaggacaagtcggcggtc
tacctgaacgaatgccgccgcatgggcatcagggtgctgccgccgaacgtcaatgagtcc
gaggcgaacttcgccgcccagggtgacgacgtgatcctcttcggcctcacggcggtccgc
aacgtcggccagaacgtggtcgattcgatcatccgctgccgcaaggcgaaggggaagtac
gcctcgttccccgactatctcgacaaggtcgacgcggtcgtctgcaacaagcggaccacg
gagtcgctgatcaaggccggcgcgttcgacgagatgggccacacccgcaaggggctgacg
gcgcactacgaatcgatgatcgacaatgtcgtccaggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggcgggatgggcgacgacagcgcggacgagggacccggcttcggg
ctggacatcgagttctccgacgtcgagtgggacaagacgtatctgctggcccaggagcgc
gagatgctcgggctgtacgtctccgaccacccgctcttcggcctggagcatgtgctgtcc
gacaaggcggacgccgccatcgcccaactgaccggcggtgattacgcggacggctcgatc
gtcaccatcggcggcatcatctccggcctccagcgcaagatgaccaaacagggcaacgcc
tgggccatcgccaccgtcgaggacctcgccggctccatcgactgcatgttcttccccgcg
acctaccagctggtgtccacccaactcgtcgaggacaccgtcgtcttcgtcaagggacgg
ctcgacaagcgtgaggacgtcccgcggctggtcgccatggagatgatggtccccgatctg
tcggaggcggggacgaacgcccccgtgacgatcaccattccgacggtcaaggtcaccccg
ccgatggtcgagaagctgggcgaggtgctcagcagccaccgcggctccacggaggtgcgg
atcaagctccagggcgcgcggaagaccacggtgctgcggctggaccggcaccgcgtcacg
cccgatccatcgctgttcggtgatctgaaggtgctgctcggcccgtcctgcctggcgggc
tga
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