Streptomyces halobius: K9S39_33280
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Entry
K9S39_33280 CDS
T09588
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
shau
Streptomyces halobius
Pathway
shau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K9S39_33280 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shau03400
]
K9S39_33280 (uvrA)
DNA repair and recombination proteins [BR:
shau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K9S39_33280 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K9S39_33280 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_16
nSTAND1
AAA_21
AAA_33
AAA_25
AAA_22
DnaJ_CXXCXGXG
Viral_helicase1
ATPase
cobW
HC2
Motif
Other DBs
NCBI-ProteinID:
UQA96094
LinkDB
All DBs
Position
7315993..7319106
Genome browser
AA seq
1037 aa
AA seq
DB search
MADRLIVRGAREHNLRNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECGRPIARQSPQAIVDKVLELPEGSRFQVLSPLVRERKGEFVDLFSDLQAKGYSRARV
DGETVQLAEPPKLKKQEKHTIEVVVDRLTVKESAKRRLTDSVETALGLSGGMVILDFVDL
DADDPQRERMYSEHLYCAYDDLSFEELEPRSFSFNSPFGACPECTGIGTRMEVDPELIVP
DEERSLDEGAIHPWSHGHTKDYFGRLVGALADALGFRTDIPWAGLPQRAKKALLHGHKTQ
IEVRYRNRYGRQRAYTTPFEGAVPFVKRRHSEAESDSSRERFEGYMREVPCPTCDGTRLK
PIVLAVTVQGKSIAEVAAMSISDCADFLREMTLNARERKIAERVLKEVNERLRFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DLGNTLIVVEHDEDTIKTSDWVVDIGPGAGEHGGKVVHSGPLAELLANKDSVTGQYLSGK
RAIPMPAMRRPAAPGRQLTVRGAKENNLQDIDASFPLGVLTAVTGVSGSGKSTLVNDILY
THLARELQGAKTVPGRHTRVDGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLFA
ETMEAKVRGYLPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKSIAEVLDMPIEEALHFFEAVPTISRHLKTLDEVGLGYVRLGQPAPTLSGGEAQ
RVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLIAVLSGLVDKGNSVIVIEHNLEVIK
TADWVVDLGPEGGSGGGLIVAEGTPEEVAAVPASHTGKFLREILGDRVSDAAPSGNPGPG
NPGPGNPVKKIATAKRPAKKTAAKNASAKTVAAKSNAVKTATARTAAKKTAAKETATKAL
TKKAAAKKTATRARRAT
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctcatcgtccgtggcgctcgcgagcacaacctccgcaacgtctcgctc
gacctcccccgcgactccctcatcgtcttcacggggctctccgggtcgggcaagtcctcg
ctcgccttcgacacgatcttcgccgaggggcagcggcgctatgtcgagtcgctctcctcc
tacgcccggcagttcctcgggcagatggacaagcccgatgtcgatttcatcgagggcctg
tccccggcggtatcgatcgaccagaagtccacctcgcgcaacccgcgctcgacggtcggc
acgatcaccgaggtctacgactacctccggctgctcttcgcccgcatcggcaagccgcac
tgccccgagtgcgggcggccgatcgcccggcagtcgccgcaggcgatcgtcgacaaggtg
ctggagctccccgagggcagccgcttccaggtgctgtccccgctggtgcgcgagcgcaag
ggcgaattcgtcgacctcttctccgacctccaggccaagggctacagccgggcccgggtc
gacggcgagaccgttcagctcgccgagccgcccaagctgaagaagcaggagaagcacacc
atcgaggtggtcgtcgaccgcctcacggtcaaggagtccgccaaacgccggctcaccgac
tccgtcgagaccgcgctcgggctctccggcggcatggtcattctcgacttcgtcgacctg
gacgcggacgacccgcagcgcgagcggatgtattcggagcatctgtactgcgcctacgac
gacctgtccttcgaggagctggagccccgctccttctccttcaactcgccctttggcgcc
tgcccggagtgcaccggcatcggtacccgcatggaggtcgaccccgagctgatcgttccc
gacgaggagcgcagcctcgacgagggcgccatccacccctggtcgcacggccacaccaag
gactacttcggccgcctggtcggcgccctggcggacgccctcggcttccgtacggacatc
ccgtgggccgggctgccgcagcgcgccaagaaggcactgctgcacggccacaagacccag
atcgaggtccgctatcgcaaccgctacggccgccagcgggcgtacaccactcccttcgag
ggcgccgtgccgttcgtcaagcggcggcacagcgaggcggagagcgacagcagccgggag
cgcttcgagggctatatgcgcgaggtgccctgcccgacctgtgacggcacccggctcaag
ccgatcgtgctcgccgtcacggtccaggggaagtccatcgccgaggtcgcggccatgtcg
atcagcgactgcgccgacttcctgcgcgaaatgacgctcaacgcccgcgagaggaagatc
gccgagcgggtcctcaaggaggtcaacgaacggctgaggttcctggtcgacgtcggcctg
gactacctctcgctgaaccgcgccgcaggcactctctccggcggcgaggcccagcgcatc
cgactcgccacccagatcggctccggcctggtgggcgtgctctacgttttggacgagccg
tccatcggcctgcaccagcgcgacaaccaccggctgatcgagaccctggtccggctgcgc
gacctcggcaacaccctgatcgtggtcgagcacgacgaggacacgatcaagacctccgac
tgggtcgtggacatcggccccggcgccggcgagcacggcggcaaggtcgtccacagcggc
ccgctggccgagctgctggccaacaaggattccgtcaccggccagtatctgtccggcaag
cgagccatcccgatgcccgccatgcgccgccccgccgccccgggccggcagctgacggtg
cgcggcgcgaaggagaacaacctccaggacatcgacgcctccttccccctcggagtgctg
accgccgtcaccggcgtctccggatccggcaagtcgacgctggtcaacgacatcctctac
acccacttggcgcgcgagctgcagggcgccaagacggtgcccggccggcacacccgggtg
gacggcgacgatctggtggacaaggtcgtccatgtcgaccagtcgccgatcggccggacc
ccgcgctccaacccggcgacgtacacaggagtcttcgaccacgtccgcaagctgttcgcg
gagacgatggaggccaaggtccgcggctatctgccgggccgcttctccttcaacgtcaag
ggcggccgctgcgagaactgctccggcgacggcaccatcaagatcgagatgaacttcctg
ccggatgtgtacgtgccgtgcgaggtctgccatggcgcgcgctacaaccgggagacgctg
gaggtgcactacaagggcaagtccatcgccgaggtgctggacatgcccatcgaggaggcg
ctgcacttcttcgaggcggtgccgaccatctcccggcatctgaagacgctcgacgaggtc
ggcctggggtacgtccgcctcggccagcccgcaccgacgctctccggcggcgaggcgcag
cgcgtgaagctggcgagcgagctccagaagcggtcgacgggccgtacggtctatgtcctg
gacgagccgaccaccggtctgcacttcgaggacatcagcaagctgatcgcggtgctgtcc
gggctggtcgacaagggcaactcggtgatcgtcatcgagcacaacctcgaagtgatcaag
acggccgactgggtcgtcgacctgggtccggagggcggcagcggcggcggactgatcgtc
gccgaggggacgcccgaggaggtcgcggcggtcccggccagccacaccggcaagttcctg
cgggagatcctcggcgaccgggtcagcgatgccgcgccgtcggggaatccggggcccggg
aatccagggccggggaacccggtgaagaagatcgcgacggcgaagcggccggccaagaag
acggcggccaagaacgcgtcggcgaagacggtcgcggcgaagtcgaatgcggtgaagacg
gccacggcccggacggcagccaagaagacggcagccaaggagaccgcgaccaaggctctg
acgaagaaggccgccgcgaagaagacggcgacgcgggcccgtcgggcgacctga
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