Streptomyces halobius: K9S39_34205
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Entry
K9S39_34205 CDS
T09588
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
shau
Streptomyces halobius
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shau03009
]
K9S39_34205
Enzymes [BR:
shau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
K9S39_34205
Ribosome biogenesis [BR:
shau03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K9S39_34205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UQA96255
LinkDB
All DBs
Position
7513545..7514711
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AA seq
388 aa
AA seq
DB search
MRSSGRNSRDGGRGGGDYRAGAGGGTSRSKSPGYRREVPPGGKRDEKQQRAGRPRPEERR
YDAGGSAGGERGGGGKSGSRGAAARGGAKGGPRTGAVAKGARPGGKGAPQRGRGQAPARP
RELDAKIEERNRARHDKPRVKSPKTFGDQEGERLQKVLARAGMGSRRACEELIEQARVEV
NGRIVMEQGVRVDPEKDEIKVDGLTVATQSYLFFALNKPAGVVSTMEDPDGRQCLGDYVT
NRETRLFHVGRLDTETEGIILLTNHGELAHRLTHPRYGVKKTYLAAIQGPLPRDLGKRLK
DGIELEDGYARADHFRIVENTGKNYLVEVTLHEGRKHIVRRMLAEAGFPVDRLVRTSFGP
IALGDQKSGWLRRMTNTEVGMLMREVEL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcagcggcaggaacagcagggacggcgggcgcggtgggggcgactaccgcgcc
ggcgcgggtgggggcacttcccggtcgaagtcccccggctaccgccgggaggtaccccca
gggggaaagcgggacgagaagcagcagcgcgccggccggccccgtcctgaggagcgccgt
tacgatgcgggcggatccgccggcggcgaacgcgggggcggcggaaagagcggcagccgg
ggcgctgcggcccgcggcggcgccaagggcggtccgcgcaccggtgccgttgccaagggg
gcccgccccggaggcaagggcgcgccccagcggggccgtgggcaggcgcccgcgcggccc
cgtgagctggacgccaagatcgaggagcgcaaccgcgcccgccacgacaagccgcgggtc
aagagccccaagaccttcggcgaccaggagggcgagcgcctgcagaaggtgctggccagg
gccggtatgggctcgcggcgagcctgcgaggagctgatcgagcaggcacgcgtcgaggtc
aacggccggatcgtcatggagcagggcgtccgggtcgacccggagaaggacgagatcaag
gtcgacggcctgacggtcgccacccagtcgtatctcttcttcgcgctcaacaagcccgcc
ggcgtcgtctccacgatggaggacccggacggccgccagtgcctgggcgactacgtcacc
aaccgtgagacgcggctgttccacgtcggccggctggacaccgagaccgagggcatcatc
ctgctcaccaaccacggcgagctggcccaccgtctgacgcatccgcggtacggcgtgaag
aagacctatctcgccgcgatccagggcccgctcccgcgtgacctgggcaagcggctcaag
gacggcatcgagctggaggacggctacgcccgcgccgaccacttccggatcgtggagaac
accggcaagaactatctcgtcgaggtgaccctccacgagggccgtaagcacatcgtccgc
cggatgctcgccgaggccggcttcccggtggacaggctggtccgtaccagcttcggcccg
atcgcgctgggcgaccagaagtccggctggctgcgccggatgaccaacaccgaggtcggc
atgctgatgcgcgaggtcgagctgtaa
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