Streptomyces halobius: K9S39_39565
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Entry
K9S39_39565 CDS
T09588
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shau
Streptomyces halobius
Pathway
shau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K9S39_39565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shau03400
]
K9S39_39565
Enzymes [BR:
shau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K9S39_39565
DNA repair and recombination proteins [BR:
shau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K9S39_39565
Prokaryotic type
K9S39_39565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UQA97156
LinkDB
All DBs
Position
complement(8667712..8668389)
Genome browser
AA seq
225 aa
AA seq
DB search
MAARPLQDIVEPGWAKALEPVAGRIAAMGDFLRAEIAAGRTYLPAGNNVLRAFQQPFDEV
RVLIVGQDPYPTPGHAVGLSFSVAPDVRPLPGSLENIYRELHSDLGMPRPSNGDLTPWTR
QGVLLLNRALTTAPRKPAAHRGKGWEEVTEQAIRALVARDRPLVSVLWGRDARNLRPLLS
DLPAVESAHPSPMSADRGFFGSRPFSRTNELLVRQGAQPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcacgacctcttcaagacatcgtcgaaccgggctgggccaaggcacttgagccc
gtcgccggacggatcgccgcgatgggcgacttcctgcgggcggagatcgccgcggggcgt
acgtatctgccggccggcaacaacgttctgcgcgccttccaacagcccttcgatgaggtg
cgggtgctcatcgtcggacaggatccctaccccacaccggggcacgcggtcggactgagc
ttctccgtggcgccggatgtgcgtccgctgcccgggagcctggagaacatctaccgcgag
ctgcactccgatctcgggatgccccggccgtccaacggcgacctcacgccgtggacgcgg
cagggtgtactgctgctgaacagggcgctgacgacggcaccccgcaagccggcggcgcac
cgcggcaagggctgggaggaggtgaccgagcaggccatccgcgcgctggtggcacgtgac
cgtccgctggtgtcggtgctgtgggggcgtgatgcgcgcaatctgcggccgttgctgagt
gatcttccggccgtcgaatcggcgcacccctcccccatgtccgcggatcgtgggttcttc
ggctcgcggccgttcagccggacgaacgagctgctggtgcggcagggggcacagcctgtg
gactggcggctgccctga
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