Streptomyces hawaiiensis: CEB94_03590
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Entry
CEB94_03590 CDS
T06917
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
shaw
Streptomyces hawaiiensis
Pathway
shaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEB94_03590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shaw03021
]
CEB94_03590
03019 Messenger RNA biogenesis [BR:
shaw03019
]
CEB94_03590
Transcription machinery [BR:
shaw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CEB94_03590
Messenger RNA biogenesis [BR:
shaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CEB94_03590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
Spore_III_AA
DUF3086
AAA
NACHT
Motif
Other DBs
NCBI-ProteinID:
QCD54056
UniProt:
A0A6G5R8G2
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All DBs
Position
742865..744010
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AA seq
381 aa
AA seq
DB search
MTTTLENPPVHQQDTGHRTVSGVLDIDASGKGHLRAESFLPSPADAAVSPALIRRYGLRK
GDLVEGVLGDRRGLTDVERVDGRTAGNPRDRRAFQDLTPLHPHERLRLEHPSAGLAGRVV
DLITPVGKGQRGLIVAPPKTGKTVLLQQLAAAVTGNHPECRLMMLLLDERPEEVTDMQRC
VRGEVYASTFDRSAKQHIALADLVIERAKRLVEAGEDVVILLDSLTRLCRAHNNAAASGG
RILTGGVDATALTGPKRFFGAARSAEEGGSLTILATALVETGSRADDFYFEELKSTGNME
LRLGRDPASRRVFPAVDIIPSGTRREELLLPPAELAAVHGLRRVLQGRDGQGALETLLER
MRETPDNATFLRRIQPTLPSG
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccctggaaaacccacccgtacaccagcaggacaccgggcaccggaccgtg
tccggtgtcctcgacatcgacgcgagcgggaaggggcacctgcgcgccgagagcttcctg
ccctcgcccgccgacgccgccgtctcccccgcgctgatccgccggtacggcctgcgcaag
ggcgacctcgtcgagggcgtgctcggcgaccggcgcggcctcaccgacgtcgaacgggtc
gacggccgtacggccgggaacccgcgcgacaggcgcgccttccaggacctgacgccgctg
cacccgcacgagcggctgcggctcgagcacccgtccgccggactggccggacgcgtcgtc
gacctgatcacaccggtcggaaagggccagcgcgggctcatcgtggccccgcccaagacc
ggcaagaccgtcctcctccagcagctcgccgccgccgtcaccggcaaccatcccgagtgc
cggctgatgatgctgctgctcgacgaacggcccgaggaggtcaccgacatgcagcgctgt
gtgcgaggcgaggtgtacgcctcgaccttcgaccgcagcgccaagcagcacatcgcgctc
gccgacctcgtgatcgagcgcgccaagcggctcgtcgaggccggcgaggacgtcgtcatc
ctcctcgactcgctgacccggctgtgccgggcccacaacaacgcggccgcctccggtggc
cgcatcctcaccgggggtgtcgacgcgaccgcgctcaccggccccaagcggttcttcggc
gccgcccggtcggccgaggagggcggttccctcaccatcctcgcgaccgccctggtggag
accggctcccgggccgacgacttctacttcgaggagctgaagagcaccggcaacatggag
ctccgcctcggccgggatccggcgtcccgccgcgtcttcccggccgtcgacatcatcccc
tcgggtacccgtcgcgaggaactcctcctgcctccggccgagttggcggccgtccacggc
ctgcggcgcgtgctgcagggccgggacgggcagggcgcgctggagacccttctggagcgg
atgcgcgagacgccggacaacgcgacattcctgcggcgcatccagcccacgctgccctcg
ggctga
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