Streptomyces hawaiiensis: CEB94_08755
Help
Entry
CEB94_08755 CDS
T06917
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
shaw
Streptomyces hawaiiensis
Pathway
shaw00040
Pentose and glucuronate interconversions
shaw01100
Metabolic pathways
shaw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shaw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CEB94_08755
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CEB94_08755
Enzymes [BR:
shaw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CEB94_08755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QCD54933
UniProt:
A0A6G5R9T8
LinkDB
All DBs
Position
1865729..1866832
Genome browser
AA seq
367 aa
AA seq
DB search
MKRALPLRLHAALATMALAAATGTLVSMPEASAATGSATGYAAQNGGTTGGAGGRTVRAT
TGTAIHQALCGRASTSTPIIIEVAGTINHANTKKVSGSGCDTADGVIELKKVSNVTVVGV
GSGAVFDQLGIHIRESKNIIIQNVTVRNVKKSGSPTSNGGDAIGIERNVRNVWIDHTTLE
ASGGESEGFDGLFDLKDNTQYVTLSYSVLRNSGRGGLVGNSESDRSNGYITYHHNRYENI
DSRAPLLRGGIAHIYNNHYVRLNESGINSRAGARAKVDNNYFEDSKDVLGTFYTDQAGYW
QVGGNIFDNVTWSSPGSENRPAGPDPKSNTTVTLPYSFTADAAGCVPAIVNRTAGAGKGL
QVSDGKC
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagcactccccctgaggctccacgcggcactggccacgatggccctcgccgcc
gcgaccggcacgctggtgtcgatgcccgaggcatcggcggcgaccggcagcgccaccggc
tacgcggcccagaacggaggaaccaccggcggcgccggaggccggacggtccgggcgacg
acgggaacggcgatacaccaggccctgtgcggccgggcgagcacgagcaccccgatcatc
atcgaggtcgcgggaaccatcaaccacgccaacaccaagaaggtctccggcagcggctgc
gacaccgccgacggcgtgatcgagctcaagaaggtcagcaacgtgaccgtcgtcggagtc
ggcagtggcgccgtcttcgaccaactgggcatccacatccgcgaatcgaagaacatcatc
atccagaacgtgaccgtccggaacgtcaagaagtcgggctcccccacgtccaacggcggg
gatgccatcggtatcgagcgcaacgtccgcaacgtctggatcgaccacaccaccctggag
gcctcgggcggcgagtcggagggcttcgacggcctgttcgacctcaaggacaacacccag
tacgtgaccctgtcctacagcgtcctgcgcaactccggccggggcggcctggtcgggaac
agcgagagcgaccggtcgaacggctacatcacgtaccaccacaaccggtacgagaacatc
gactcgcgcgccccgctgctgcgcggcggcatcgcgcacatctacaacaaccactacgtg
cgcctcaacgagtccggcatcaactcccgggccggcgcccgcgccaaggtggacaacaac
tacttcgaggactccaaggacgtcctcggcaccttctacaccgaccaggccggctattgg
caggtcggcggcaacatcttcgacaacgtgacctggtccagccccggcagcgagaaccgt
ccggccggccccgacccgaagtcgaacaccaccgtcaccctcccgtactcgttcactgcg
gacgccgccggctgcgtgccggccatcgtgaaccgaacggcgggcgccggcaagggcctt
caggtctcggacggcaagtgctag
DBGET
integrated database retrieval system