Streptomyces hawaiiensis: CEB94_10775
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Entry
CEB94_10775 CDS
T06917
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
shaw
Streptomyces hawaiiensis
Brite
KEGG Orthology (KO) [BR:
shaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shaw03019
]
CEB94_10775 (hrpB)
Enzymes [BR:
shaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CEB94_10775 (hrpB)
Messenger RNA biogenesis [BR:
shaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CEB94_10775 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
ResIII
AAA_19
AAA_30
CON_HrpB
AAA_22
AAA_11
nSTAND3
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QCD55295
UniProt:
A0A6G5RB50
LinkDB
All DBs
Position
2293257..2295767
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AA seq
836 aa
AA seq
DB search
MIRYDALDALPVRAALPALAEALEGHGTAVLVAPPGTGKTTLVPPTLAGLLGEGPERRVI
VAEPRRIAARAAARRMAWLLGEKPGESVGYTVRGERVVGRHTRVEVVTTGVLVQRLQRDQ
ELAGADVVVLDECHERHLDADTAAAFLWDVRQTLRPELRLVAASATTDAQGWARLLGGAP
VVEAQGTAYPVEAVWVPPVRPVRPPHGMRVDPALLTHVASVVRRALAERDGDVLCFLPGV
GEIARVAGQLGGLGDVEVLQVHGRAPAAVQDAVLVPGQRRRVVLATSVAESSVTVPGVRV
VVDSGLAREPRVDHARGLSALTTVRASQAAGRQRAGRAGREAPGAVYRCWAEAEDARLPR
YPSPEIKVADLTAFALQVACWGDPDASGLALLDGPPGGAMAAARNVLTAVGAVDSVGRAT
ERGVRLSRLGLHPRLGRALLDGSGSVGVDRAAEVIALLSEEAPREYGDDLTGALRRARRG
GDAYAGRWRAEVRRLRAASPGAPGTSQGPENLSDDQQVGLVAALAFPERVAKADGGSYLM
ASGTRAEAGDGSALRGSPWIAVAMADRPVGKGHARVRLGAVIDEETARLAAGALLEERDE
VGWDDGDVVARRVERLGAVELAVRALRDADPGLVRDALLDGLRREGFGLLRWSAEADALR
QRLAFLRLHLGAPWPDVSDDALHARVEEWLEPELGRARRRADLARIDAGQALARLLPWAS
GVAGRLDELAPEQMTVPSGSRIRIDYSRPEQPVLAVKLQEMFGLQESPRVAGVPLLVHLL
SPAGRPAAVTADLASFWREGYKGVRAELRGRYPKHPWPEDPAGAEPTRHTNARLRR
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgttacgacgctctggacgccctgcccgtacgcgctgccctgcctgccctggcc
gaagccctggaggggcacggcaccgccgtcctcgtggcgccgcccggcaccggcaagacg
accctggtgccgccgacactggcgggactgctcggggaggggcccgagcggcgggtgatc
gtggccgagccgcggcggatcgcggcccgggccgcggcgcggcggatggcgtggctgctg
ggcgagaagcccggcgagagcgtcggctacaccgtgcgcggggagcgggtcgtcgggcgg
cacacgcgcgtggaggtcgtcacgaccggtgtgctcgtccagcgtctgcaacgggaccag
gagctggccggtgccgacgtggtggtgctcgacgagtgccacgagcggcacctggacgcg
gacacggcggcggccttcctctgggacgtgcggcagaccctgcgcccggagctgcggctg
gtggccgcctcggcgacgaccgacgcgcaggggtgggcgcggctgctgggcggggcgccg
gtggtcgaggcgcaggggacggcgtatccggtggaggccgtgtgggtgccgccggtgcgg
cccgtgcgtccgccgcacgggatgcgggtggatccggcgctgctgacgcatgtggcgtcc
gtggtgcggcgggcgctggccgagcgggacggggacgtgctgtgtttcctgccgggcgtg
ggcgagatcgcccgcgtcgccgggcagctcggggggctcggtgacgtcgaggtgctccag
gtgcacgggcgggcgccggcggccgtccaggacgcggtactggtgcccgggcagcggcgg
cgggtcgtgctggccacgtccgtcgcggagtcgtctgtgacggtgcccggggtgcgcgtg
gtcgtggactcggggctggcgcgcgagccgcgggtggaccacgcgcgcgggttgagcgcg
ctgacgacggtacgggcgtcgcaggccgcggggcggcagcgggcggggcgggccgggcgt
gaggcaccgggggcggtgtaccgctgctgggcggaggccgaggacgcgcgtctgccgcgc
tatccgtcgccggagatcaaggtggccgacctgacggcgttcgcgctgcaggtggcgtgc
tggggggatccggacgcgtccgggctggcgctgctggacgggccgccgggtggggcgatg
gcggcggcgcggaatgtgctgacggcggtgggggcggtggactccgtcgggcgcgccacc
gagcggggagtccggctgagccggctgggtttgcatccccggctggggcgggcgctgctg
gacgggtccggctcggtcggggtggacagggccgctgaggtcatcgcgctgctcagtgag
gaggctccgcgggagtacggggatgacctgacgggtgccttgcgtcgtgctcggcgtggg
ggcgacgcctatgccgggcggtggcgggcggaagtacggcggctgcgggccgcctctccg
ggagccccgggcacttcccaggggccggagaacctctccgatgaccagcaggtgggcctc
gtcgccgctctggcctttcccgagcgcgtcgccaaggccgacggagggtcgtatctcatg
gcgtccgggacccgtgccgaggccggggacgggagcgcgttgcgcggttcaccctggatc
gccgtcgccatggccgaccggcccgtcggcaaggggcacgcgcgtgtgcggctcggggct
gtgatcgacgaggagacggcccggctcgcggccggcgccctgctggaggagcgggatgag
gtcgggtgggacgacggggacgtcgtggcgcggagggtggagcggctgggggcggtggag
ctggcggtgcgggcgctgagggacgccgatcccgggctcgtgcgcgacgcgttgctcgac
gggttgcggcgggaggggttcgggctgctgcggtggtcggcggaggccgatgccctgcgg
cagcggctcgcgttcctgcggctgcatctcggtgcgccctggccggacgtgtccgacgac
gcgctccacgcgcgcgtggaggagtggctggagccggagctcggccgggcgcggcggcgg
gccgatctggcacggatcgatgccgggcaggcgctcgcccggctgctgccctgggcctcg
ggagtggcggggcggctcgacgagctggccccggagcagatgaccgtgccgagcgggtcg
aggatccggatcgactactcccggcccgagcagcccgtgctggcggtgaagttgcaggag
atgttcgggctccaggagtcgccgcgggtcgccggggtgccgctgctcgtgcatctgctg
tccccggcgggccggccggccgctgtcaccgccgatctcgcctcgttctggcgggagggc
tacaagggtgtacgggcggagctgcggggccgctatccgaagcatccgtggcccgaggac
ccggcgggcgccgagccgacccggcacaccaacgcgcggctcaggcggtga
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