KEGG   Streptomyces hawaiiensis: CEB94_27855
Entry
CEB94_27855       CDS       T06917                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
shaw  Streptomyces hawaiiensis
Pathway
shaw03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:shaw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CEB94_27855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shaw03400]
    CEB94_27855
Enzymes [BR:shaw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CEB94_27855
DNA repair and recombination proteins [BR:shaw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CEB94_27855
SSDB
Motif
Pfam: LigD_Prim-Pol
Other DBs
NCBI-ProteinID: QCD58233
UniProt: A0A6G5RJI0
LinkDB
Position
complement(5913858..5914739)
AA seq 293 aa
MAPITEVEGRRLALSNLEKVLYPATGFTKGEVLHYYATVAEVLLPHLRDRAVSFLRYPDG
PDGQVFFTKNVPPGTPDWVTTAEVPRVEGPSRMVLVQDLPSLMWSANLVAEFHTHQWLVD
TPDEADRIVFDLDPGAPATIVQCCEVALWLRERLARDGIEAYAKTSGSKGLHLLAAVRGA
SSERVSEYAKALAVEAEKAMPRLALHRMTRSLRPGKVFVDWSQNAARKTTATPYTLRARP
EPTVSAPVTWEEVRECRAPGRLDFHAVDIAPRIQDYGDLLAPLLDTDGAGALP
NT seq 882 nt   +upstreamnt  +downstreamnt
atggcgcctatcacggaggtggaggggcgacggctcgctctcagcaatctggagaaggtg
ctgtatcccgccaccggcttcaccaagggcgaggtgctgcactactacgcgaccgtcgcc
gaggtcctgctgccccatctgcgtgatcgggcggtgtccttcctgcggtatccggacggg
ccggacgggcaggtgttcttcacgaagaacgtgccgccgggtacgcccgactgggtcacc
accgccgaggtgccacgggtcgaggggccctcgcggatggtcctggtgcaggatctgccg
agcctgatgtggtcggcgaacctcgtggccgagttccacacccaccagtggctcgtcgat
acgccggacgaggccgaccggatcgtcttcgacctcgatccgggggcgccggcgaccatc
gtgcagtgctgcgaggtcgcgctgtggctgcgggaacggctcgcccgggacggcatcgag
gcctacgccaagacttccggctcgaaggggctgcatctgctcgccgccgtgcggggggcg
tcctccgagcgggtctccgagtacgccaaggcgctcgccgtcgaggccgagaaggccatg
ccgcgactcgcgctgcaccggatgaccaggagcctgcgtccggggaaggtcttcgtcgac
tggagccagaacgccgcccgcaagacgacggcgaccccctacaccctccgggcccgcccg
gaaccgaccgtctcggccccggtgacgtgggaggaggtcagggagtgccgcgcacctggc
cggctggacttccacgcggtcgacatcgccccgaggatccaggactacggcgacctgctc
gctccgctgctggacacggacggggcgggggcgttgccgtag

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