Streptomyces hawaiiensis: CEB94_29500
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Entry
CEB94_29500 CDS
T06917
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
shaw
Streptomyces hawaiiensis
Pathway
shaw02020
Two-component system
shaw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
shaw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CEB94_29500
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CEB94_29500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shaw03021
]
CEB94_29500
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
shaw02035
]
CEB94_29500
Transcription machinery [BR:
shaw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CEB94_29500
Bacterial motility proteins [BR:
shaw02035
]
Flagellar system
Flagellar assembly proteins
Stator
CEB94_29500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_31
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QCD58521
UniProt:
A0A6G5RL17
LinkDB
All DBs
Position
6280223..6281065
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AA seq
280 aa
AA seq
DB search
MPQHTSGSDRAAIPPAARDGGSVRPPAPSTLDELWRSYKATGDERLREQLILHYSPLVKY
VAGRVSVGLPSNVEQADFVSSGVFGLIDAIEKFDIGREIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARNVERAYATLEARLRRTPTEGEVASEMGIAVEELHAVFSQLSLANVVAL
EELLHGSGEGGDGLSVMDTLEDTAADNPVEVAEDRELRRFLARAINTLPDREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLASFGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtccgaccgggcggcgatccccccagccgcccgtgacggt
ggcagcgtgcggccgcccgctccctcgacactcgacgagttgtggcggtcgtacaaggcg
acgggggacgagcggctgcgtgagcagctgatcctgcactactcgccgctggtgaagtac
gtcgcgggacgggtcagcgtgggactgccgtccaacgtcgagcaggcggacttcgtctcg
tccggggtgttcgggctgatcgacgcgatcgagaagttcgacatcggccgcgagatcaag
ttcgagacgtacgcgatcacccggatccgcggcgcgatgatcgacgaactgcgggccctg
gactggatcccccgctcggtgcggcagaaggcgcgcaacgtggagcgtgcgtacgccacg
ctggaggcacggctgcggcggaccccgaccgagggcgaggtggcctccgagatgggcatc
gccgtcgaggaactccacgcggtgttcagccagttgtcgctggccaacgtggtggccctg
gaggagctgctgcacgggagcggtgagggcggcgacgggctcagcgtcatggacacgctg
gaggacaccgccgccgacaaccccgtcgaggtcgccgaggaccgggagctgcggaggttc
ctggcgcgggcgatcaacacgctgcccgaccgggagaagaccgtggtcacgctgtactac
tacgagggcctcaccctggccgagatcgggaacgtgctgggtgtgaccgagagccgcgtc
agccagatccacaccaagtcggtgctgcaactgagagcgaaactggcgagcttcggccgc
tga
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