Streptomyces hawaiiensis: CEB94_31495
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Entry
CEB94_31495 CDS
T06917
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
shaw
Streptomyces hawaiiensis
Brite
KEGG Orthology (KO) [BR:
shaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shaw03016
]
CEB94_31495
Enzymes [BR:
shaw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CEB94_31495
Transfer RNA biogenesis [BR:
shaw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CEB94_31495
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Regnase_1_C
Motif
Other DBs
NCBI-ProteinID:
QCD58856
UniProt:
A0A6G5RM55
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All DBs
Position
complement(6759571..6760860)
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AA seq
429 aa
AA seq
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MTDAHDTAADSSLRTTGGAPPDDGGSSAEEAPIPLLEPREGIPPVIADETALARMIAAFE
AGSGPVAVDAERASGYRYGQRAYLVQLRREGAGTALIDPVACPDLSALGDALSGVEWVLH
AATQDLPCLREIGMVPTRLFDTELAGRLAGFPRVGLGAMVESVLGFVLEKGHSAVDWSTR
PLPEPWLRYAALDVELLVDLRDALEKELDRQGKLEWARQEFDAIASAPPPEPRKDPWRRT
SGMHKVRRRRQLAVVRELWQTRDRIAQRRDVSPGKVLGDAAIVEAALALPANVHALAALN
GFGHRVGKRQLEQWQAAVDRAKGLSEAQLPQPGQAVTGPPPPRAWADKDPAAAARLSAAR
AGISAVAEQLGMPQENLITPDTVRRVCWEPPAVVDTQSVAAALAGHGARPWQVEQVAPVL
VEALSAKEA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccacgacaccgcagcagacagctcactgcgaaccaccggaggcgctcct
ccggacgacggcggatcttctgctgaggaggcgccgatccctttgctggaaccgcgtgag
ggcattccgcccgtcatcgcggacgagaccgccctggcccggatgatcgccgccttcgag
gcggggtccgggcccgtcgccgtcgacgccgagcgcgcgtccggttaccgctacgggcaa
cgcgcctacctcgtgcagttgcgccgcgagggcgccggaacggccctgatcgaccccgtg
gcctgccccgacctgtccgccctcggtgatgccctgtccggcgtcgagtgggtgctgcac
gccgccacccaggacctgccctgcctgcgcgagataggcatggtgccgacacggctgttc
gacacggagctggccggacggctcgccgggttcccccgggtcggcctcggcgcgatggtc
gagagcgtgctgggcttcgtcctggagaaggggcactccgccgtcgactggtcgacccgg
ccgctgcccgagccctggctgcgctacgcggcgctggacgtcgagctcctcgtcgacctg
cgcgacgcgctggagaaggagctggaccggcagggcaagctggagtgggcccgccaggag
ttcgacgcgatcgcctcggctcccccgcccgagccccgcaaggacccgtggcggcgtacg
tccggcatgcacaaggtgcgccggcggcggcagctggccgtcgtacgggagctgtggcag
acccgggaccggatcgcgcagcggcgggacgtctcgcccggcaaggtgctcggggacgcg
gcgatcgtggaggccgcgctggcgcttccggccaatgtgcacgcgctggccgcgctgaac
ggtttcgggcaccgcgtgggcaagcggcagctggagcagtggcaggcggcggtggaccgg
gcgaaggggctgagcgaggcgcagttgccgcagccggggcaggcggtgaccgggccgccg
ccgccgcgtgcctgggccgacaaggaccccgcggccgcggcgcggttgtccgcggcccgg
gcggggatctcggcggtggccgagcagctcggcatgccgcaggagaatctgatcacgccg
gacacggtgcggcgggtgtgctgggagccgccggcggtggtggacacccagtcggtggcg
gccgcgctggcagggcatggtgcgcggccgtggcaggtggagcaggtggcgccggtgctg
gtggaggcgctgtccgcgaaggaggcctga
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