Salmonella enterica subsp. enterica serovar Heidelberg B182: SU5_0102
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Entry
SU5_0102 CDS
T02011
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
shb
Salmonella enterica subsp. enterica serovar Heidelberg B182
Pathway
shb03030
DNA replication
shb03410
Base excision repair
shb03420
Nucleotide excision repair
shb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SU5_0102
03410 Base excision repair
SU5_0102
03420 Nucleotide excision repair
SU5_0102
03440 Homologous recombination
SU5_0102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shb03032
]
SU5_0102
03400 DNA repair and recombination proteins [BR:
shb03400
]
SU5_0102
Enzymes [BR:
shb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SU5_0102
DNA replication proteins [BR:
shb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SU5_0102
DNA repair and recombination proteins [BR:
shb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SU5_0102
NER (nucleotide excision repair)
GGR (global genome repair) factors
SU5_0102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFH43484
LinkDB
All DBs
Position
120492..123278
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AA seq
928 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKVGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNK
DVAYLSYKLATIKTDVELELTCEQLEVQQPIADELLGLFKKYEFKRWTADVESGKWLQAK
GAKPAAKPQETVVIDESPSEPAAALSYENYVTILDDVTLESWIEKLKKAPVFAFDTETDS
LDNIAANLVGLSFAIEPGVAAYVPVAHDYLDAPDQISRQRALELLKPLLEDEKVRKVGQN
LKYDRGVLQNYGIELRGIAFDTMLESYILNSVAGRHDMDSLSDRWLKHKTITFEDIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQQHKGPLNVFENIEMPLVPVLSRV
ERNGVKIDPAVLHKHSEEITLRLAELEKKAHDIAGEAFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYLIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLPLDSVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNAARRAGAE
RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDLDAVAKRI
HQLMENCTRIDVPLLVEVGSGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccagaaaacccacttattctcgtagatggctcatcctatctctatcgc
gcctatcatgcgtttccgccgttaaccaacagcgcgggagaacctacgggcgcaatgtat
ggtgtcctcaacatgttgcgcagcctgatcatgcagtatcagccgacgcatgctgcggtg
gtgtttgacgccaaaggaaaaaccttccgtgatgagctctttgaacattacaaatcgcat
cgtcctccgatgccggatgatctgcgagcgcaaatagagccgttacatgccatggttaaa
gccatggggttaccgctgctggcggtctctggcgtagaagcggatgacgttatcggtaca
ctggcgcgagaagcggagaaggtgggccgtccggtattaatcagcaccggcgataaagat
atggcacagttggtgacgccgaatattacgctgatcaacaccatgactaacaccatcctc
ggcccggatgaagtcgttaataagtacggcgtgccgcctgagctgattatcgactttctg
gcgctgatgggggactcctcggataatattccaggcgtaccaggcgtgggtgagaagacg
gcgcaagccttgcttcagggattgggcggcctggatacgctgtacgccgagccggaaaaa
attgccggcctcactttccgcggcgccaaaacgatggccggtaaattagcgcagaataaa
gacgtagcgtacctgtcttataaactcgccaccattaaaacggatgttgaactggagctg
acctgcgaacagcttgaagtgcagcagccgattgcggatgaactgctgggcctgtttaaa
aaatatgagtttaagcgctggacggcggacgtcgagtcaggcaagtggctacaggcaaag
ggcgcgaaaccggcggccaaaccgcaggaaacggtcgttattgatgaatcgcccagcgaa
ccggcagcggcgctctcttatgaaaattatgtcactattctggacgacgttacgctggaa
agctggattgaaaagctgaaaaaagcgccagtttttgctttcgacacggagaccgacagc
ctggataatatcgccgccaacctggtgggcctctcgtttgccatcgaacctggcgttgcc
gcgtatgtacctgtcgcgcatgattatctggacgctccggatcaaatctcccgccagcgt
gctctggaactgctgaagccgctgctggaagatgaaaaagtgcgcaaagtggggcaaaac
ctcaagtacgatcgcggcgtcttgcaaaattacggtattgagctgcgcggtatcgccttc
gataccatgcttgagtcttacattctgaacagcgtcgccggacgccatgatatggacagc
ttgtccgatcgttggctgaagcacaaaactatcacctttgaagacattgccggtaaaggt
aaaaaccagctcacctttaaccagatcgcactggaggaagcggggcgctatgcggcagaa
gatgcggatgtcacgttacagttgcatctcaaaatgtggcctgagctccagcagcacaaa
ggcccgctgaatgttttcgaaaacatcgaaatgccgctggtgccggtactgtcacgcgtt
gagcgcaatggcgtaaaaatcgatcctgccgtcctgcacaaacattcggaagaaatcaca
ctacgtctggcggaactggaaaagaaagcgcatgacattgcgggcgaagcgttcaacctg
tcctcgacgaagcagttgcagactatcctgtttgaaaagcagggtattaagccgttgaag
aaaacgcctggcggcgcgccgtcaacgtcggaagaggtgctggaagagctggcgctggac
tatccgctgccgaaagtgattttggagtatcgtggtctggcgaagctaaaatccacctat
accgataagctgccgctgatgattaacccgaaaaccgggcgcgtccatacgtcctatcat
caggcggtaacggcgacgggacgtttatcgtccaccgatccgaacctgcaaaatattccg
gtgcgcaatgaagaaggccgccgcattcgtcaggcatttattgcgcctgaggattatctc
atcgtatctgcggactattcacagattgagctgcgtattatggcgcatctttcccgtgat
aaagggctgctcacggcgttcgccgaagggaaagatattcaccgtgcaacggcggcggaa
gtctttggcttgccgctggatagcgtgaccggggaacagcgccgaagtgcgaaagccatt
aactttggcctgatttacgggatgagcgccttcggtctttctcgccagcttaatattccg
cgtaaagaggcgcagaagtatatggatctctacttcgaacgctatcctggcgtgctggaa
tatatggagcgcacccgcgctcaggcaaaagaacaaggctatgtggaaactctggagggg
cgccgcctttacctgccggatattaaatccagcaacgcggcgcggcgcgcgggggcggaa
cgcgcggcgatcaatgctcccatgcaaggaacggctgccgatatcatcaagcgcgccatg
attgccgtcgatgcctggctacaggccgagcagccacgcgtgcggatgattatgcaggta
cacgatgaattagtgttcgaggtgcataaagacgacttagatgcggtagcaaaacgtatc
catcagttgatggaaaactgcacgcgtattgatgtgccgttgctggtggaagtcggtagc
ggagaaaattgggatcaagcgcactaa
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