Salmonella enterica subsp. enterica serovar Heidelberg B182: SU5_0329
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Entry
SU5_0329 CDS
T02011
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
shb
Salmonella enterica subsp. enterica serovar Heidelberg B182
Pathway
shb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SU5_0329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shb03400
]
SU5_0329
DNA repair and recombination proteins [BR:
shb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SU5_0329
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SU5_0329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
AAA_25
NACHT
Viral_helicase1
T2SSE
cobW
ExoX-like_C
ScfRs
Motif
Other DBs
NCBI-ProteinID:
AFH43706
LinkDB
All DBs
Position
complement(374152..376977)
Genome browser
AA seq
941 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRNDLSQRLAESFETALELSGGTAVVADMDDE
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPDL
SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVDAPWASLSANVHKVVLYGSGKENIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLNREARH
VFVENTPLPAISDMSIGHAMDFFTNLKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPMLK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaatattaacctcgtc
atcccccgcgacaaactgattgtcgtgaccgggctttcgggttcaggcaaatcctcactg
gctttcgacactctgtatgccgaagggcagcgtcgttacgttgaatcgctctccgcttac
gcgcggcagtttttgtcgctcatggaaaaaccggatgtcgaccatattgaggggctatcg
cccgcgatctcaattgaacagaaatcgacatcgcacaacccgcgctctacggtgggtact
attaccgagatccacgactacctgcgcctgctgtttgcccgcgtgggcgagccgcgttgt
ccggaccatgacgtgccgctggcggcgcaaaccgttagccagatggtcgataacgtactg
tcacagccggaaggcaaacgtctgatgctgctcgcgccgattattaaagagcgtaaaggc
gaacacaccaaaacgctggaaaatctggcaagccagggttacattcgcgcccgtattgac
ggcgaagtctgcgatctctccgatccgccgaagctggagctgcaaaagaaacataccatt
gaggtggtgatcgatcgcttcaaagttcgcaacgatctttcccaacgcctggcggagtcg
ttcgaaacggcgctggaattatccggcggcacggcggttgttgccgatatggacgatgag
aaagcggaggagcttctgttctccgctaattttgcttgtccgatttgcggctacagtatg
cgcgagctggaaccgcgtctgttctcgttcaacaacccggcaggtgcctgcccgacctgt
gacggcctcggcgttcagcaatatttcgatccggaccgcgtgatccagaatcccgacctg
tcgctggcaggcggcgcgattcgtggttgggatcgtcgcaatttttactactttcaaatg
ctcaagtcgctggcggaacactataagttcgacgtggatgcgccgtgggcaagcctcagc
gccaacgtacataaagtcgtgctatacggttccggcaaagagaatattgaatttaaatat
atgaacgatcgcggcgatacttccgtgcgccgccatccgttcgaaggcgtgctgcataat
atggagcgccgttataaagagacggaatccagcgcggtgcgcgaagagctggcgaagttc
atcagtaatcgcccctgcgccagctgtgaaggaacgcgactgaatcgcgaagcgcgccat
gtatttgtggaaaatacgccgctgcctgctatttccgatatgagcattggccatgcgatg
gattttttcactaatctcaagctttccgggcaacgggcgaaaatcgccgaaaaagtgcta
aaagagatcggcgatcgcctcaagtttctggtgaacgtcggcctgaactatctcacgctc
tcccgctcggcagagacgctttccggcggcgaagcccagcgtattcgtctggcgagccag
ataggcgccgggttagtcggcgtgatgtatgtgctggatgagccgtccatcggtctgcac
cagcgcgataacgaacggctgctgggtacgctgattcatctgcgcaatcttggcaatacc
gtgattgtggtggaacacgatgaagacgccatccgcgccgccgaccatgtgattgatatt
ggccccggcgcgggcgttcacggcggcgaggtggtggcggaaggcccgctggaagccatt
atggcggtaccggaatcgctgaccggccagtacatgagcggtaaacgcaaaattgaagtg
ccgaaacaacgcgtgccggcaaatccagaaaaagtgctcaaactcaccggcgcgcgcggc
aacaacctgaaagatgtgacccttacgctaccggtagggctgtttacctgtatcaccggc
gtctcgggttccggtaaatcgacgctgattaacgacacgctgttccccatcgcccagcgt
cagttaaacggggcgactatcgccgaaccggcgccgtatcgggatattcaggggctggaa
catttcgataaagtgatcgatatcgaccagagcccgatcgggcgcaccccgcgttccaac
ccggcgacctatacgggtgtctttaccccggttcgcgagctttttgctggcgtgccggag
tctcgctcgcgcggctatacgccagggcgattcagcttcaacgtgcgcggcggtcgctgc
gaagcgtgccagggcgatggcgtcattaaagtcgaaatgcactttctgccggatatttac
gtgccgtgcgaccagtgcaaaggcaagcgctataaccgggaaacgctggagattaagtac
aaaggcaagaccatccacgaagtactggatatgaccattgaagaagcgcgtgagttcttt
gatgcggttccggcgctggcgcgtaagctgcagacgctgatggacgtggggctgacctat
atccgtcttggtcagtcggcgacaacgctttccggcggcgaggcccagcgcgtgaagctg
gcgcgcgaactgtcgaagcgcggcaccgggcagacgctgtatattctcgacgagccaacc
accggcctgcactttgccgatattcagcagttgcttgacgttctgcatcagttgcgcgat
cagggcaacaccatcgtggtgatcgaacacaacctggacgtcattaaaacggcggactgg
attgtcgacctcggcccggaaggcggcagcggcggcggcgaaattctcgtctccggtacg
ccggaaaccgtggcggagtgcgaggcgtcgcataccgcccgcttccttaaacctatgctc
aaataa
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