Salmonella enterica subsp. enterica serovar Heidelberg B182: SU5_04042
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Entry
SU5_04042 CDS
T02011
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
shb
Salmonella enterica subsp. enterica serovar Heidelberg B182
Brite
KEGG Orthology (KO) [BR:
shb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shb03021
]
SU5_04042
Transcription machinery [BR:
shb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SU5_04042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
KORA
HTH_10
HTH_25
UCR_14kD
HTH_3
SANT_DAMP1_like
WASH_WAHD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AFH47362
LinkDB
All DBs
Position
complement(4407010..4407864)
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AA seq
284 aa
AA seq
DB search
MTKEMQNLALAPVGNLESYIRAANAWPMLSADEERALAERLHYQGDLEAAKTLILSHLRF
VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM
TFDMSSDDESDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDII
RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaaatttagctttagcccctgttggcaacctggaatcttatatc
cgggcggcgaacgcgtggccgatgttatcggctgacgaggagcgggcattggctgaaagg
ctgcattaccagggcgatctggaagcagctaaaacgctgatcctgtctcacctgcgcttt
gttgttcatattgctcgtaactatgcgggctatggtctgccgcaggcggatttgatccag
gaaggcaacatcggcctgatgaaagccgtacgtcgtttcaacccggaagtaggcgtgcgc
ctggtctccttcgccgtacactggattaaagcagaaattcacgaatacgtgctgcgtaac
tggcgtatcgttaaagtcgcaaccacgaaagcgcagcgtaagctgttctttaatctgcgt
aaaaccaagcagcgtctgggctggtttaatcaggatgaggttgaaatggtggcgcgcgaa
ctgggtgtttccagtaaagacgtgcgtgagatggagtcgcgtatggcggcgcaggacatg
acgtttgacatgtcttcggacgatgagtccgacagccagccaatggcgccggtgctgtat
ctgcaggataaatcgtctaactttgccgacggcattgaagacgataactgggaagagcag
gccgctaaccgactgaccgatgcgatgcaggggctcgacgagcgtagccaggatattatc
cgcgctcgctggctggacgaagacaataagtctacgttgcaggagctggccgatcgttac
ggcgtctccgctgagcgtgtgcgccagcttgaaaagaacgccatgaaaaagcttcgcgct
gcgatcgaagcgtaa
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