KEGG   Staphylothermus hellenicus: Shell_0023
Entry
Shell_0023        CDS       T01249                                 
Name
(GenBank) THUMP domain protein
  KO
K07583  tRNA pseudouridine synthase 10 [EC:5.4.99.25]
Organism
shc  Staphylothermus hellenicus
Brite
KEGG Orthology (KO) [BR:shc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:shc03016]
    Shell_0023
Enzymes [BR:shc01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     Shell_0023
Transfer RNA biogenesis [BR:shc03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Shell_0023
SSDB
Motif
Pfam: Pus10_C Pus10_THUMP_arc THUMP Rad50_zn_hook
Other DBs
NCBI-ProteinID: ADI31175
UniProt: D7DAH8
LinkDB
Position
complement(19886..21199)
AA seq 437 aa
MEESSTENQSAKIIKTAKALLARYPLCHHCLGRQFAKYGLQLKNSERGYAIKTILQMILH
KELQDKIIDKETLRKYAVNAGDPITRLYEKIYEEKVEPAKCYICGNKLGEEYFEDLARKV
AELLEQYNAYTFIVGVSLSQETMLREIEVSSFSGLETSESIKNEIKREVGKIVRDKYGYI
PDFDRPDVMVIIDYETDMVRAVVNPILFEGRYWKRGRNISHTIWLSKTGIKEYPYSLEEF
FNDRLREIFESERIVLHASGREDVDARMLGTGRPMVIEVKNPRFRYVDMDLINELLRSTL
IEAEITGYSSRAKIEYLKGEGSKKRKAYKILVYTAEPITSDKLRMLEEEYRNRVIHQRTP
KRILRRKKDTLRIRRVYEVKTKLLHNKLFEAIVYCDGGLYVKELVHGDDGRTTPSFSDVL
GVQAYPLELDVFVVETK
NT seq 1314 nt   +upstreamnt  +downstreamnt
atggaagaatcgagtaccgagaaccaatcagccaagataattaagacagctaaggctttg
ttagcaaggtatcctttatgtcatcattgcttaggaagacaatttgctaaatatggtttg
caactgaagaattctgagagaggatacgctattaagacgattctacaaatgatccttcat
aaagagctccaggataaaatcattgataaagaaactcttagaaaatacgctgtaaacgct
ggagaccctattacaagattgtatgagaaaatatatgaggaaaaagtagagcctgcgaaa
tgttatatatgtggaaacaagctgggcgaggaatactttgaagatcttgctagaaaagtg
gctgagctgttggaacagtataatgcatatacatttatagtaggcgtgtcattgtctcag
gaaacaatgcttagagaaatagaagtatcgagtttctccgggttagaaaccagtgaatcc
attaagaacgagattaagagggaggttggaaaaatagttagagataaatatggttatata
ccggattttgatcgaccagatgttatggtgataatagattatgaaacagatatggtaaga
gcagtcgttaatccaatattgtttgagggaagatactggaagcgtggaagaaatatttca
catacaatatggttatctaaaacagggatcaaggagtatccttatagtctagaagaattc
ttcaatgataggctaagagaaatatttgaatctgaaagaatagttctccacgcttcaggc
agagaagatgttgatgctagaatgcttggaacaggtagacccatggttatcgaggtgaag
aatccaaggtttagatatgtagatatggatttaataaatgaactgctcagatcaactctt
atcgaagcagaaatcactggttattcttcaagagcaaaaatcgagtatttgaagggcgag
ggatcgaagaagaggaaagcatataagatcctagtatatacagctgagcctataactagt
gataaattaaggatgttagaggaagaatataggaatagggttattcatcaaagaacacct
aagaggatcctgagacgtaaaaaagatactctcagaataagaagagtatacgaggtcaag
actaaattgttgcataataaactatttgaagcaatagtatattgcgatggaggcttatat
gttaaagaacttgtacacggagatgatggtagaactactcctagtttctcagatgtttta
ggtgtacaagcttatccattagagcttgatgtattcgttgttgagacaaaatag

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