Staphylothermus hellenicus: Shell_0023
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Entry
Shell_0023 CDS
T01249
Name
(GenBank) THUMP domain protein
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
shc
Staphylothermus hellenicus
Brite
KEGG Orthology (KO) [BR:
shc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shc03016
]
Shell_0023
Enzymes [BR:
shc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Shell_0023
Transfer RNA biogenesis [BR:
shc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Shell_0023
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
THUMP
Rad50_zn_hook
Motif
Other DBs
NCBI-ProteinID:
ADI31175
UniProt:
D7DAH8
LinkDB
All DBs
Position
complement(19886..21199)
Genome browser
AA seq
437 aa
AA seq
DB search
MEESSTENQSAKIIKTAKALLARYPLCHHCLGRQFAKYGLQLKNSERGYAIKTILQMILH
KELQDKIIDKETLRKYAVNAGDPITRLYEKIYEEKVEPAKCYICGNKLGEEYFEDLARKV
AELLEQYNAYTFIVGVSLSQETMLREIEVSSFSGLETSESIKNEIKREVGKIVRDKYGYI
PDFDRPDVMVIIDYETDMVRAVVNPILFEGRYWKRGRNISHTIWLSKTGIKEYPYSLEEF
FNDRLREIFESERIVLHASGREDVDARMLGTGRPMVIEVKNPRFRYVDMDLINELLRSTL
IEAEITGYSSRAKIEYLKGEGSKKRKAYKILVYTAEPITSDKLRMLEEEYRNRVIHQRTP
KRILRRKKDTLRIRRVYEVKTKLLHNKLFEAIVYCDGGLYVKELVHGDDGRTTPSFSDVL
GVQAYPLELDVFVVETK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatcgagtaccgagaaccaatcagccaagataattaagacagctaaggctttg
ttagcaaggtatcctttatgtcatcattgcttaggaagacaatttgctaaatatggtttg
caactgaagaattctgagagaggatacgctattaagacgattctacaaatgatccttcat
aaagagctccaggataaaatcattgataaagaaactcttagaaaatacgctgtaaacgct
ggagaccctattacaagattgtatgagaaaatatatgaggaaaaagtagagcctgcgaaa
tgttatatatgtggaaacaagctgggcgaggaatactttgaagatcttgctagaaaagtg
gctgagctgttggaacagtataatgcatatacatttatagtaggcgtgtcattgtctcag
gaaacaatgcttagagaaatagaagtatcgagtttctccgggttagaaaccagtgaatcc
attaagaacgagattaagagggaggttggaaaaatagttagagataaatatggttatata
ccggattttgatcgaccagatgttatggtgataatagattatgaaacagatatggtaaga
gcagtcgttaatccaatattgtttgagggaagatactggaagcgtggaagaaatatttca
catacaatatggttatctaaaacagggatcaaggagtatccttatagtctagaagaattc
ttcaatgataggctaagagaaatatttgaatctgaaagaatagttctccacgcttcaggc
agagaagatgttgatgctagaatgcttggaacaggtagacccatggttatcgaggtgaag
aatccaaggtttagatatgtagatatggatttaataaatgaactgctcagatcaactctt
atcgaagcagaaatcactggttattcttcaagagcaaaaatcgagtatttgaagggcgag
ggatcgaagaagaggaaagcatataagatcctagtatatacagctgagcctataactagt
gataaattaaggatgttagaggaagaatataggaatagggttattcatcaaagaacacct
aagaggatcctgagacgtaaaaaagatactctcagaataagaagagtatacgaggtcaag
actaaattgttgcataataaactatttgaagcaatagtatattgcgatggaggcttatat
gttaaagaacttgtacacggagatgatggtagaactactcctagtttctcagatgtttta
ggtgtacaagcttatccattagagcttgatgtattcgttgttgagacaaaatag
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