Staphylothermus hellenicus: Shell_0255
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Entry
Shell_0255 CDS
T01249
Name
(GenBank) eRF1 domain 2 protein
KO
K03265
peptide chain release factor subunit 1
Organism
shc
Staphylothermus hellenicus
Pathway
shc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Shell_0255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shc03019
]
Shell_0255
03012 Translation factors [BR:
shc03012
]
Shell_0255
Messenger RNA biogenesis [BR:
shc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Shell_0255
Translation factors [BR:
shc03012
]
Eukaryotic type
Release factors
Shell_0255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-ProteinID:
ADI31394
UniProt:
D7DB47
LinkDB
All DBs
Position
complement(233779..234876)
Genome browser
AA seq
365 aa
AA seq
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MKSLYVDRRQLREIIKELKKWSAPATVLLSLYIPPGRPVSDVLNMLRQELSITDNIKLKK
TRSAVQRALKAAIERLSKIPKIPENGLALFCGEDMDTGDFICLMFVPPEKVPVYFYRTDK
HFHTEFLEEMVIENNLVGLIIIERDAATLGLLKGSRLEILKEIEDYIPGKHHRGGQSQRR
FDRIIEQMVHDFYKRVGERAKEKFLPLLEQGKLKAILIGGPAYSKYDFIEGDYLDYRLKQ
LVLPRLIDVSYQGEVGLREMIMKASDLLKEQEYVDALKAVEEFKLHLAKDDGMIIYGEED
VKRALEMSAIKTLIIDEDRPDAHQWAELAKKHGAKPVFLSDDVPEGAWIKKTFGGLVGIL
RYRIY
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
attaagtcattatatgttgataggagacagcttcgagaaataattaaagaacttaaaaaa
tggagtgctccagctactgttctcctaagcctatatattcctccaggtagacctgttagt
gatgtattaaatatgcttcgacaagaactctcaattaccgataatattaaattaaagaag
acaagatcagctgttcaaagagcattaaaggctgctattgagagattaagcaagatacca
aagatccctgagaacgggttagcattattttgtggagaagacatggatacaggagacttc
atatgcttaatgtttgttccaccagaaaaagtacctgtttatttctatagaacagataaa
catttccacacagaattcctcgaagaaatggttattgaaaacaacctagtaggccttata
attattgagagggatgctgctactctaggattattgaagggaagcaggctggaaatatta
aaggagatagaagattacatacctggaaagcatcatagaggcgggcaaagccagcgaaga
ttcgatagaataattgagcaaatggttcacgatttctataaacgtgtaggggaacgcgcc
aaagaaaaattcttgcctctacttgaacaaggtaaattaaaagctatacttattggtggc
ccagcatatagtaaatatgatttcattgaaggagactatctagattataggctgaaacag
cttgttctaccaagacttatagatgtaagttatcaaggagaagttggtttgagagaaatg
attatgaaagcctctgatctattaaaggaacaagaatatgtagatgcattaaaagctgta
gaagaattcaagcttcatctcgcaaaagatgatggaatgattatatatggtgaagaggat
gttaagagagcgctcgaaatgagcgctattaaaacactaataatagatgaagacagacca
gatgctcatcaatgggctgaactagcaaagaaacatggtgctaaaccagtatttctaagc
gacgatgtcccagagggagcatggattaagaaaacatttggaggattagtaggaattcta
agataccgtatttactag
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