Staphylothermus hellenicus: Shell_0721
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Entry
Shell_0721 CDS
T01249
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
shc
Staphylothermus hellenicus
Brite
KEGG Orthology (KO) [BR:
shc00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
Shell_0721
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrD-helicase
Cas3-like_C_2
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
ADI31840
UniProt:
D7DCE3
LinkDB
All DBs
Position
684951..688088
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AA seq
1045 aa
AA seq
DB search
MVTVFLRIKTKVVLEKLGYNYLYRVEKGSEPEYSNVKFSDIVPEFSSHRIGGFKLYKHQY
MGYQALALGKNLIIRSGTGSGKTEVWILHAMNMVKKNEKTHVLVLYPTLALANDQIKRIR
DYLSLINNEPLQLDSVRRAELETSIGKRGLRDLIGKTNIVISNPAFILHDVKKLLLHPTR
SLLYSFYKRLDMIVVDEIDFYGPRSLALLLALLKILSEYSDVKPQIAVLTATLSNPEDLG
MYLRDITGREYEVVEGKPFNVDNYQYIILGKNLENIWKILVNNKEHVENIEDPIIRNELL
KAIDSYKYFAGNIHRIISIAQSQGIDLPSPSVDYGEIINEYLEDDHVTLVFTYSISMAEE
VVRTVKHRYGEDKPIASHHHLVPKKKREEIEERARKGLIKVIVSPRTLSQGIDIGTIARI
VHLGLPSDVREYYQREGRKGRRKELGFAETVIIPFSRWDKELLSRGFKVFEKWLGLGIEK
TLVNPDNLYIYLFTGLAKLLSPWYREKLNELEKKALRKTGVLTEKRVNEKLMKWIFERIN
FYEFAPPYGIKRYLVKGDKLIPLEPIGHCDLVEKFQPGNIDYSEEAIITHLDTGKTARYV
RAVYEKPVREINFYSEDAFAVALEEYRYIKMNWGEKPSILRDILAGRLTSEELCVVYTPW
NGFGKYRKIPDRCVWKLRSEKPKVLVRGDKAIVYYDRRQIYVPKPTAGEYRDYTYGYLYS
VDPGENSDLLRLGLAMLMILLRRIYGIAFETIMYDVIKLGEYKYFSLHEPEAAGIIDKIN
WLDVRRKIEDYKFDDLDIILLSEIDDISYSILITYEFDWEIIRQQMLRIIDYILARDRIK
VLLGGKEIAVPKPSPALKLLALSLMVEVVGEETELPRILVAINAYDGEKHYPAIALYPPI
PYIKPPNEILEVEKRLLEKIMYEDYKIIIPNKEKTLYQLKTANMRQLALIIENMPEKTID
ITQMIQTINLRNISFQELANQYTGQEKTMNPSRIREILKTIREKMTIYDTHRKQIIEYLR
NMSETTYLSYLIIQNLKNTIEKNTG
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggtgacagtgtttttgcgtataaaaactaaagtagtattggaaaagctgggatataat
tatttgtatagggtagaaaaaggaagtgagcctgaatattcaaatgtaaagttttcagat
attgttccagagttttctagtcatcgaataggaggtttcaagctttataaacaccaatat
atgggatatcaagcactggctcttggaaaaaacttgattataaggtctggaactggtagt
ggcaagactgaggtttggattcttcacgctatgaatatggttaagaagaatgagaagaca
catgtcctcgtattatatcctacacttgcattagcaaatgatcaaataaaacggataaga
gattatttaagcctaataaacaatgagcctctccaacttgatagtgttcgtagagcagag
cttgaaacgagtattgggaagagaggcttgagagaccttataggaaaaaccaacattgta
atatctaatccagcatttatactacacgatgttaagaaactattattacatcctactcgt
tccctcctctatagcttctataaacgcttagatatgattgttgttgatgaaatagatttt
tatggtccccggagtcttgcattactacttgcactactcaaaatattatcagagtatagt
gatgtaaaacctcaaatcgctgttttaactgctactttatctaatcccgaagatttaggt
atgtatttaagagatataacggggcgagaatacgaggttgtagagggtaaaccgtttaat
gtagataattatcaatatattattctaggcaaaaacctcgagaacatttggaaaattctt
gtaaataataaagaacatgttgagaacatagaggatcctattataagaaatgaattactt
aaagctattgattcatataaatattttgctggaaacatacatagaataatttctattgct
caatcacaaggaatagatcttccatctccaagcgttgattatggagaaataataaatgag
tatcttgaagacgatcatgttacactagtattcacttatagtatttctatggcggaagaa
gttgttagaactgttaagcataggtatggggaggataaacctatagcttcccatcaccac
ctagtacctaagaagaagagagaggagatagaggaaagggcccgtaaaggattaataaaa
gtaatagtttctcctagaacattgtctcaaggaatagatataggcacaattgctagaata
gtacatttaggattaccaagcgatgtacgcgagtattatcagagagaaggacgtaagggt
agaaggaaagaattaggctttgcagaaacagttatcatacctttttctagatgggacaaa
gaactattatcccggggattcaaggtattcgagaaatggcttggactaggtattgagaaa
acacttgttaatccagataatctctacatctatttattcacaggtttagcaaagctatta
tctccttggtatagagaaaaacttaatgaactagagaaaaaagctcttaggaaaacaggt
gttctcacggaaaaaagagttaatgaaaaacttatgaaatggatctttgaaagaattaat
ttctacgaatttgcacctccatatgggattaaaagatacctggttaaaggcgacaagcta
atcccactagaacctattggacactgtgatttagtcgagaagttccagcctggaaacatt
gattactctgaggaagcaatcattacacatttagatactgggaagactgcacgttatgtg
cgagcagtttatgagaaaccggtacgtgaaataaacttttacagtgaggacgcttttgcg
gtagcgttagaggagtatagatatattaagatgaattggggagagaaaccaagtattcta
agagacatattagctggtaggctaacatctgaagaactctgtgtggtctatacaccttgg
aacggttttgggaagtataggaaaatacctgataggtgcgtatggaaacttagatcggag
aagcccaaggtcctggttcgcggagataaagctatcgtatactatgatcgtagacaaata
tatgttccaaaaccgacagccggagaatatagagactatacatatggttacttatacagc
gttgatcctggagaaaacagtgatctgctaagactaggtttagcaatgctcatgatcctg
ttgaggagaatatatggtatagcttttgaaacaataatgtatgatgtcataaaactgggg
gaatacaagtatttcagcctccacgaaccagaagctgctgggataattgataagattaac
tggttagatgttaggagaaaaattgaagactacaagtttgacgacttagacattatccta
ttatcagaaatagatgatatatcttattcgattctgataacatatgagtttgactgggaa
ataattaggcaacaaatgctgcgtattatagattatatattagcgagagacaggatcaag
gtattacttggtggaaaagaaatagcagtgcctaagcccagtccagcattgaaactatta
gcattgtcgttaatggttgaagtagtaggcgaagaaacagaattgccgcgaatacttgta
gcaataaatgcttatgatggggaaaaacattatccggcaatcgctctatatccgcccata
ccctatattaaacctcccaatgaaatacttgaggttgagaaaagacttttagaaaagatc
atgtatgaggactacaagatcattatacctaacaaggagaaaacattataccagctgaaa
actgctaatatgaggcaactagcattaattattgaaaatatgccggagaaaacaattgat
ataacacaaatgatccaaacaataaatcttagaaatatttctttccaagaactagcaaat
cagtatactggacaagaaaaaacaatgaatccatcaagaataagagaaatattaaagaca
atccgtgaaaaaatgaccatatacgatacacatagaaaacaaatcatagaatacctgaga
aacatgtctgaaacaacatacttatcatacctaattatacaaaatcttaaaaatacaatt
gagaaaaatactggataa
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