Staphylothermus hellenicus: Shell_0741
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Entry
Shell_0741 CDS
T01249
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
shc
Staphylothermus hellenicus
Brite
KEGG Orthology (KO) [BR:
shc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shc03400
]
Shell_0741
DNA repair and recombination proteins [BR:
shc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Shell_0741
Archaeal homologous recombinant proteins
Shell_0741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_21
AAA_29
BRE1
SMC_N
HrpB7
AAA_27
AAA_15
Laminin_II
AAA_22
Rad50_zn_hook
AAA_16
FliJ
AAA_25
SbcC_Walker_B
DUF1664
LURAP
Motif
Other DBs
NCBI-ProteinID:
ADI31859
UniProt:
D7DCG2
LinkDB
All DBs
Position
complement(708030..710528)
Genome browser
AA seq
832 aa
AA seq
DB search
MIILGLRLKNIRSYTDKTIVFPRKGITVIYGDVGTGKSTILSSIAYALFGQPRSRIPDPM
ERYAYPKGEDLLRIGKRNGYVRLLILQKNRIILVERGLSRRSDGKVSDTGGRLLVFKYTE
ENGELKIKPILNRYYSSEELKKRVLNELGIPEIISKQKPLIFTNTIYVPQFSVNDIINLG
DKERTLLINKALNIDKYNHIKTNLDKLTRQILNSEIRNMKSQEQRIENILSKNDIEELKR
KISEDEKEINNINMEIQQVEEAKKELENEIKKYQEQYEKKQEERNNIQQKLAVIKYNLKI
LREKEDKIKQLTSLLGINESIPPHVLLSKIKSELEEIDKQIKMVDQQKQELQKKIEEYSR
RLDTINEEINKYREKIGGLKEKIKDKKDDLSKKQEELREKEELLRKGICPLCKQKIPHEH
GIKLIDSLNNEIEMIEKEILELEQLLRKNHEELKGYEEKKSEINEEIEHLEQQLKSVDEE
KDKLINEKMELNNKLSKLSEIERLHDEIEKLRQSIRDRDLLEKQLMQVEESINRLKEVID
EKTKNQKLLMEKEKELIGKREKMKAEIEYYKKQIQQFEDFLKEYQSVREQRIFLEKMKKF
LYGERTRRGYFYDLVEKVEERVRSLAYDKFRALFIEYFLRLMEDHEILDVDLDEKFRPVF
RIKTGRVTGEITQPSGGQLTSVSLAYRLALNTVARKMTPQLRNSTLILDEPTYGFSPERV
EKLRELLYEISNRGKRQIIVVTHDRNLLEVGDCKIKLDINRENNETIVSYEECTALTKEY
YTFIENLLSKRDESITTIREEERTEKGLSAGFEPKFRGKRTSKPRNIFDFLA
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatcatattagggcttagactaaaaaacattcgcagctacacagataagacaatagta
tttcctcgaaaaggtattacagtaatatatggagatgttggaacaggtaaatcaacaata
ttatcaagtatagcatatgcattatttggacaacctagatccaggatccctgatcctatg
gagagatatgcttatcccaaaggcgaagacctcctaagaatagggaaaagaaatggatat
gttagactattaattctgcaaaagaacaggataatacttgttgaaagagggctatctaga
agatcagatggtaaagtaagtgatacgggcggtagattattagtattcaagtacacggaa
gagaatggtgagctaaagatcaaacccattcttaacaggtattactcctctgaggaatta
aagaagagagttctaaacgaactaggtatacctgaaataatatcaaagcagaaaccacta
atattcacaaacaccatatatgttccacaattcagtgtaaacgacattattaacttagga
gataaggagagaacattattaataaataaagcattaaacattgataaatacaatcatata
aagacaaacctagataagctaacacgccagatcctcaacagtgaaataagaaacatgaag
agccaggaacaaagaatcgaaaacattctcagtaaaaatgatatagaagagctaaaaaga
aagatcagcgaggatgaaaaagagataaacaatattaatatggaaatccagcaagtagaa
gaagccaaaaaagagctggaaaatgagatcaagaaataccaggaacaatacgagaaaaaa
caggaagaacgcaacaatatacagcagaaactagctgttataaagtataacttaaaaata
ctacgagaaaaagaagataaaataaaacagctaacaagccttctaggaataaatgaatct
ataccaccacatgttttattatctaaaattaagagtgaactagaagaaatagacaaacaa
ataaagatggttgatcaacaaaaacaagaactccagaagaaaatcgaagaatatagtcgt
agactagatacaataaacgaagaaataaacaagtatagggaaaaaataggtggactaaaa
gaaaagatcaaggataaaaaagatgatttatctaaaaaacaagaagaacttcgtgaaaaa
gaagagctgttgaggaaaggaatatgtcctctctgtaaacaaaagatcccgcatgaacac
ggcattaaattaattgattcattaaacaacgaaatagaaatgatcgagaaggagatattg
gagcttgaacaactacttagaaagaaccatgaagaattaaaaggatatgaggagaaaaaa
tcagagatcaatgaggaaatcgaacatttagaacagcaactaaaaagtgttgatgaagaa
aaagacaagcttatcaatgaaaaaatggagttaaacaataaactatctaagctctcagaa
atagaaaggcttcacgacgaaatagagaagttgagacaaagtattagggatagagatcta
ttagagaaacagcttatgcaagtagaagaatcaattaataggttaaaggaagtaattgat
gaaaaaactaaaaaccagaaattattgatggagaaagaaaaagagctaatcggtaagaga
gaaaagatgaaggctgaaatagaatattataaaaaacaaattcaacaatttgaagacttt
ctaaaagagtatcaaagcgttagggagcaaagaattttcctagaaaagatgaagaaattc
ctatatggtgaaagaactaggagaggctatttctatgacttggtggaaaaggttgaggaa
agagttaggagcttagcttatgataagttcagagcattatttatagaatacttcttaagg
ctgatggaagatcatgagatactagatgtcgatctagatgaaaaatttagaccagttttc
cgaataaaaactgggagggtaacaggtgaaattacacagccaagcggtggacaattaaca
agtgtcagcttagcttatcgtttagcactaaatactgtagctagaaaaatgactccccaa
ttaagaaatagcacgttaatacttgatgagccaacttatggatttagccctgaaagagtt
gagaagctccgagagcttctatacgagataagtaatcgtggtaaaagacaaataattgtt
gtaacacatgatcgcaacctactagaagttggagattgcaaaataaaacttgatattaac
agagaaaacaacgaaacaatagttagctatgaggaatgtactgccttaactaaagaatac
tatacattcatagaaaacctattatccaaaagagacgaatcaataacaactataagagaa
gaggagagaacggagaaaggcctaagcgcgggattcgagccaaaatttagaggcaagaga
acaagtaagcctagaaacatattcgattttctagcttag
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