Staphylothermus hellenicus: Shell_1133
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Entry
Shell_1133 CDS
T01249
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shc
Staphylothermus hellenicus
Pathway
shc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Shell_1133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shc03400
]
Shell_1133
Enzymes [BR:
shc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Shell_1133
DNA repair and recombination proteins [BR:
shc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Shell_1133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
SSV1_D-63
Motif
Other DBs
NCBI-ProteinID:
ADI32234
UniProt:
D7D8Y8
LinkDB
All DBs
Position
complement(1102098..1102736)
Genome browser
AA seq
212 aa
AA seq
DB search
MGSNNCNELARLAEEIKKCRKCTLYLSRKNAVPGEGPCNADVMFVGEAPGSKEDETGRPF
VGAAGKLLMQLLELIGLKRSDVYITNVVKCRPPNNRDPTPEEIEACSPYLIRQIKIIKPK
IIVALGRHSARFLFSRAGLKWSNMRRMHGKVFSARIDGVEVKIMATYHPAAALYSPKLRP
DLENDFRVLESLIHGIHGKSTTKYRTILDFLK
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgggatctaataactgcaacgaactagctaggcttgctgaagaaataaagaagtgtcga
aaatgcacgttgtacttaagtaggaaaaacgctgttccaggtgaggggccctgtaatgct
gatgtaatgtttgttggcgaagcccccggcagtaaagaagatgaaaccggtagacccttt
gttggtgctgcaggtaagctcttaatgcagttgctggagcttatagggttgaagagatca
gatgtttatatcactaatgttgtaaagtgtaggccgccgaataaccgtgatccaactcct
gaggaaatagaagcttgttcaccgtatctgataaggcagataaaaattataaaaccaaaa
ataattgttgcgttgggaagacattcagcaagatttttgttttctagagcaggtttaaaa
tggtctaatatgaggagaatgcatggaaaagtattctctgcaagaatagatggtgtcgaa
gtaaaaattatggctacttatcatccagcggctgctctgtattcgcccaagcttcgtcct
gatttagaaaatgatttccgtgttctcgagagtcttatacatggtattcatggaaagtct
acaactaagtataggaccatacttgattttctaaagtaa
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