Staphylothermus hellenicus: Shell_1310
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Entry
Shell_1310 CDS
T01249
Name
(GenBank) phosphoesterase DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
shc
Staphylothermus hellenicus
Pathway
shc03410
Base excision repair
shc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Shell_1310
03430 Mismatch repair
Shell_1310
03440 Homologous recombination
Shell_1310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shc03400
]
Shell_1310
DNA repair and recombination proteins [BR:
shc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Shell_1310
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Shell_1310
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Shell_1310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
ADI32403
UniProt:
D7D9F7
LinkDB
All DBs
Position
1258842..1259828
Genome browser
AA seq
328 aa
AA seq
DB search
MSRWVVLVHGDSDGVCSGALIYRYLSSKNNVVEVFFTHPAGLASDLAEFTRNGDNMFIAD
IALSEQHLYDIEKILRERSRYGEIIYVDHHPEPLRLKPYELPGIIIHDICCSASELTYRF
LEEKGLAQEYSRVALYGAIGDYLDETSWVKKTINEWDKRSIYFEAGVLVQGLEGSRKMYD
FKRRIVRLLADNRLPSENSELLLRALIQSHNDEELRIWVRRNVCIKGKVSYVADPPGSIG
RAANYARVYGGSRVGLAYETRGNMLIMSLRAINGIDLNTILRKITVSLGGTGGGHAFAAG
ARISSDKFNEFLELLNKNIDKNNDSGKT
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
ttgtctagatgggttgttcttgtccatggggatagtgatggtgtttgcagtggagcactc
atatataggtatctttcctcgaaaaacaatgttgttgaagtattttttacgcatccagca
ggtttggcaagtgatctagcggagtttacacgtaatggggacaatatgtttatagccgat
attgctctaagcgagcaacacctctacgatatagagaagattttacgtgagagaagcaga
tatggtgaaataatatatgttgatcatcatccagaacctttaaggcttaaaccatacgaa
ctacccggtataataattcatgatatttgttgttcagcatcagagctaacatataggttt
ctcgaagaaaaaggccttgctcaagaatatagtcgtgtagcactatatggtgctataggt
gattatctagatgagacaagctgggttaagaaaacaattaatgaatgggataagagaagc
atttattttgaagcaggagttcttgtacaaggcttagaaggctctcgtaaaatgtatgat
ttcaaaaggagaatagttcgtttattagcagataacaggctgcctagtgagaactcagag
ttattgttaagagcacttatacagagccataatgatgaagaacttagaatatgggttaga
agaaatgtatgtattaagggaaaagtctcgtatgtagctgatcccccgggaagtattggc
cgtgcagcgaattatgctagagtttatgggggtagcagagttggtttagcatatgagaca
agaggaaatatgctgattatgagtctcagagctattaatggaattgatctaaacactatt
ctgagaaaaataactgtctcattagggggaacaggtggaggacatgctttcgcagctggt
gctaggatctcatctgataagttcaatgagttcctagaactattgaataagaatatagac
aaaaacaatgattcggggaaaacctag
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