Staphylothermus hellenicus: Shell_1367
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Entry
Shell_1367 CDS
T01249
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
shc
Staphylothermus hellenicus
Brite
KEGG Orthology (KO) [BR:
shc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shc03016
]
Shell_1367
Enzymes [BR:
shc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Shell_1367
Transfer RNA biogenesis [BR:
shc03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Shell_1367
Prokaryotic type
Methylthiotransferases
Shell_1367
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Beta-tre_PLH30
TRAM_2
DUF6046
PDDEXK_10
Motif
Other DBs
NCBI-ProteinID:
ADI32456
UniProt:
D7D9L0
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All DBs
Position
1323523..1324812
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AA seq
429 aa
AA seq
DB search
MARRVYIETYGCALNRGDEYIMKTVLVSRGHRLVNEIAEADTIIINTCTVRYDTELKMIK
RIKELYKIASEQNKKLIVAGCMAKAQPYKIHKIAPRASLVSPQNASKIWIAVESDKQVFL
LKGERDRNILGTHVDKQIAYLPIQEGCLGNCSFCIVKNARRQLVSYPINKIKNTVEELVG
KGVVEIELTGQDTASYGLDLYGKQKLPHLLEELDRIKGNFMIRIGMMNPDTLANILDELV
EIIKYSAHIYRFLHIPLQSGSDKVLRVMKRKYTVDEYREIIKTLRKKIPEISIATDIIVG
HPGEEEEDFEQTLSIIKELKFERIHPAVYSIRPNTYSASLRQVPTSDKKIRMLRLLKIIE
DVGLEIHRKYLGKILDTFVTEYSNTWIGRTLNYIPVIIFSNNTLNFGDHVKTQITNATFY
DLRGVIVSS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaagagtatatattgaaacatatggttgcgctctgaataggggagacgaatac
attatgaaaacagtgctggttagcagagggcatagactagttaatgaaatagcagaagca
gatactattataataaatacttgcacggtaagatacgatacagaactaaaaatgattaag
agaataaaggaactctacaaaatagctagtgaacaaaataaaaaactaatagtcgctggc
tgcatggctaaggctcaaccatataaaatacataaaatagcacccagagccagtcttgtt
tctccacaaaacgcttccaagatatggatagctgttgaaagcgataaacaagtatttcta
ttaaaaggcgaacgtgatagaaatattcttggaacacatgttgataaacaaatagcctac
ttaccgatacaagaaggatgcttagggaactgtagcttctgcatagtaaagaatgcccgt
agacaacttgtaagctacccgataaacaagataaaaaacacagtagaagaactagttggt
aaaggagtggtagaaatagagttaacgggtcaagacacagcatcttatggattagatctt
tatggaaaacagaaactaccccatctcctcgaggaactagatagaataaaaggtaatttc
atgataagaattggaatgatgaatccagatacactagccaatattcttgatgaactagta
gaaatcattaagtacagcgcacatatttaccgcttcctacatataccgcttcaaagcggc
agcgataaagtactaagagtcatgaagaggaaatatacagtagatgagtatcgagagata
attaagactttgagaaagaaaatacctgaaataagcatagcaacagatattatcgtgggg
catccgggagaggaagaagaggattttgaacaaacactaagtattataaaggaattaaaa
tttgaaagaatacatccagctgtttatagtataaggccaaatacttattcagcatcgcta
cgtcaagtgccaacaagcgataagaagatcagaatgcttagattattgaagatcatagaa
gatgttggattagagattcatagaaaatatttaggaaaaatcttggatacttttgtaaca
gaatacagcaatacatggatagggagaactctaaactacataccagtcataatattttcc
aacaatacgttaaacttcggagatcacgtaaagacacaaataactaatgcaacattctat
gatttaagaggagttattgtttcatcctaa
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