Staphylothermus hellenicus: Shell_1384
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Entry
Shell_1384 CDS
T01249
Name
(GenBank) NusG antitermination factor
KO
K15172
transcription elongation factor SPT5
Organism
shc
Staphylothermus hellenicus
Pathway
shc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
shc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Shell_1384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shc03021
]
Shell_1384
03019 Messenger RNA biogenesis [BR:
shc03019
]
Shell_1384
Transcription machinery [BR:
shc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Shell_1384
RNA polymerase I system
Shell_1384
Messenger RNA biogenesis [BR:
shc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Shell_1384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW2_Spt5
KOW4_SPT5
Ribosomal_uL24m-like
KOW7_SPT5
NusG
SH3_KIN17_C
Motif
Other DBs
NCBI-ProteinID:
ADI32473
UniProt:
D7D9M7
LinkDB
All DBs
Position
complement(1341421..1341900)
Genome browser
AA seq
159 aa
AA seq
DB search
MSIRRKTSFYALRTTMGREIDVALVIESRIKDLKKQNRDPGVKAIFVPPGVRGYVFLETS
RLASIYRLISEVKYVKSGQPIKVSLEEVERLVKPKPVIEMIKEGDIVEIVRGPFRGMKAQ
VISIDRNKNMVVLSILEAAFNVPITVPGDYVKPTRKSGV
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
ttgagtattagaagaaaaacaagcttttacgcgttaagaacaactatgggacgagaaata
gacgtagctttagttatagagtctagaataaaggatctaaaaaagcaaaatagagaccca
ggagtaaaagcaatattcgttcctccaggtgttagaggatatgtttttctcgagacatca
agattagcatcaatctataggttgataagcgaggtaaaatatgttaagtcgggtcaacca
atcaaagtttctcttgaagaggtagaaagactagttaagcctaaacctgttattgaaatg
attaaagagggagacatagtagaaattgtgagaggaccatttagaggtatgaaggcacaa
gttattagtatagataggaataaaaacatggttgtcctgagtatattagaggctgctttc
aatgtccctataactgttccaggtgattatgtaaaacccactaggaaaagcggtgtctag
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