KEGG   Staphylothermus hellenicus: Shell_1455
Entry
Shell_1455        CDS       T01249                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
shc  Staphylothermus hellenicus
Brite
KEGG Orthology (KO) [BR:shc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shc03400]
    Shell_1455
Enzymes [BR:shc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Shell_1455
    5.6.2.6  RNA 3'-5' helicase
     Shell_1455
DNA repair and recombination proteins [BR:shc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Shell_1455
SSDB
Motif
Pfam: DEAD Helicase_C DEAD_assoc ResIII WHD_Lhr UvrD-helicase Cas3-like_C_2 DEXQc_Suv3 AAA_19 nSTAND3 HypA PhoH
Other DBs
NCBI-ProteinID: ADI32543
UniProt: D7D9U7
LinkDB
Position
complement(1392038..1394839)
AA seq 933 aa
MTNIVKCLQKIGYRELTSLQKKAFKAIYNEKNSVIIVAPTGSGKTEAALLPIMYRINKYR
YKPISAIYITPLRALNRDIKKRMEKLAKCFGVSINLRHGDTPYKIRKYIEANPPHILVTT
PETFNYILINNKMRKHLANLKYIVIDEFRDLIENKRGILLLTSIYLLEHHLRRKLIKIAL
TATLKNINLAMEILSSSTFPSNVDVLIDNTLKPIDVKVVVPQCKDNYKCKLLGSIIDDEE
LIARILRIYDLFRSKRSILIFVNTRSIAEKLGYLLKVADEKLGGNNVRVEVHHGSLSRNH
RLRVEEDFRNGYLKGLIATSSMELGIDIGFIDYVIQYMSPRQVVRLVQRIGRSGHKLFGV
SRGEIIVQNNTLQILESLVIARRAINNVIEEERIPVKPLDVLAYSIVLYSLFTGGINIYD
LYSLLIMNPIYRDLDVKEFNDLIEYLKYARLIKVRDNIIKPTSRSKLFIYKTSMIPFTKD
VIIINIVDDRRIGVLNEEYVVLNISEGDIVVIGGKPWKVIGYDQQNAKLYVEPYSASENI
VIPHWEGENIPVEYKLAREVGSLIRRISSNKKIDYYKTLLLDDKIKLEGINDLADDKTII
IEGNTELGLVIVNINGGSRVNRFMRDLLKSVVQWRYPFLRINAYSTPYAVFITLNNKQYV
REVVRTIEQVIHNINRYLNHKILKRIAIEQGTIHWRIFQVAQRFGAIDPEKNKITRAMLE
AFVDTVIGYEALNEILWKDYDIESIRKLADLVINGKIKVVSRITSKLTNGGRQLVTYYGE
IRTVMPASLAGREKYLQHIMKRRMSLICLHCGYVVTDTVSKLVNIRKCPRCGYMALAPVK
GDAEKEAIIVKKALNRTKLSRKEKAVLEDLRKRAILYSQFGELALKVLASRGVGVSEAIR
VINRVLEGHDLYSELYESEKKYLRIKTYLKDND
NT seq 2802 nt   +upstreamnt  +downstreamnt
atgaccaatattgttaaatgtctgcagaaaataggatatagggaacttacatctctccag
aaaaaagcattcaaagctatatataatgaaaaaaactctgtaataattgttgcaccaact
ggttctggtaaaacagaagctgctctgctgccaataatgtatagaataaataagtatagg
tataagccaatatcggctatttatataacaccattaagagcgcttaatagagatattaag
aaaagaatggaaaagctagctaaatgttttggggtttcaataaatttaaggcatggtgac
actccctataagatccgcaaatatattgaagcaaatccgcctcacattctcgttacaact
cctgaaacatttaattatatattgataaataataagatgagaaaacatcttgctaattta
aaatatattgttattgatgaatttagagatttaatagaaaataaacgtggtatattatta
ttaacgagtatttatctattagaacatcatctcagacgtaaacttatcaagatcgcttta
acggcaactttgaaaaatattaatttggcaatggaaatattgagtagttcaacttttcct
agcaacgtagatgtgctgatcgataatactttgaagcctatcgatgtaaaagtagtggtt
ccccagtgcaaggataattataaatgtaaacttctcggctcaattatagatgatgaagaa
ttaattgctagaattcttagaatatatgacttgtttagatctaagaggagtattctcata
tttgtcaatactagatcgatagctgagaagcttggttatttattaaaagttgctgacgaa
aaattaggaggtaataatgttcgtgtagaagttcaccatggaagcttgtcaaggaatcat
agattaagggttgaagaagattttaggaatggatatttaaaaggtttaattgcgacttca
agcatggaactaggtattgatattggatttattgattatgttattcaatacatgtctccg
agacaagttgtcaggcttgttcagagaattggtaggagcggccataaattatttggggtt
tctcgtggagaaataattgttcaaaacaatactttacaaatactagaatccctcgtaata
gctagaagagcgattaataatgttatagaggaagagagaatacctgttaagccattagat
gttcttgcttattccattgtattatatagtttgtttactgggggtattaacatatatgat
ctttactcattgttaattatgaatcctatatatagagatcttgatgtaaaagaattcaac
gacttaatcgaatacttaaaatatgctaggcttatcaaggttagagataatattatcaag
ccaacttctaggtcaaaattattcatatataaaacatcaatgattccattcactaaagac
gttataataataaatattgtagatgaccgccgaataggtgtgttaaacgaggaatacgtt
gttctaaatatctctgaaggagacatagtagttattgggggaaaaccgtggaaagtcata
ggatatgatcaacaaaatgctaaactatatgttgaaccatatagcgcatccgaaaatata
gtaatacctcactgggagggcgaaaacataccggtagaatacaagctagctagagaagtc
ggatcacttataagaagaatttcttcaaacaagaagattgactattataaaacactctta
ttggatgataaaataaaacttgaaggcattaatgatctcgccgatgataaaaccattata
attgagggaaatactgaactcggcctcgtaatagttaatattaatgggggttcaagagtt
aataggtttatgagggatctattgaaatcagtagttcaatggagatacccgtttctaaga
attaatgcatactctactccatacgcagtgttcattacattaaataataaacaatatgtt
agagaagtagttagaacaatagaacaagtaatacataatattaatcgatatctgaaccat
aaaattttaaagagaatagcaattgaacaaggcactattcattggagaatatttcaagta
gcccaacgatttggagcaatagatcctgagaaaaacaaaattactagagctatgctcgaa
gcctttgtggacactgttataggatatgaagcgttaaacgagattttatggaaagactat
gatattgaatcaatcagaaaactggctgacttagtcataaatggtaaaataaaagttgtc
tctagaattacaagtaaactaactaatggggggagacagttagtaacatattatggtgaa
ataagaacagtaatgccagcctcattggcaggtagggagaagtatttgcagcatataatg
aagaggcggatgagcttaatatgtttacattgtggatacgtggtcaccgataccgtaagc
aagttggttaatattaggaaatgtcctagatgtggatatatggctctggcaccggttaaa
ggggatgctgagaaagaagctataattgttaagaaggctttaaatagaacaaagttaagc
aggaaagaaaaggctgttcttgaagatcttaggaaacgagcaatactttattcacagttc
ggagaattagctctcaaggttctagcttctagaggagtcggggtgagcgaggctattcgt
gtaattaaccgtgtgcttgaaggccacgatttatatagcgaattatatgagagcgagaag
aagtatctaagaattaagacttatttaaaagataatgactaa

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