Staphylothermus hellenicus: Shell_1474
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Entry
Shell_1474 CDS
T01249
Name
(GenBank) tRNA intron endonuclease, catalytic domain protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
shc
Staphylothermus hellenicus
Brite
KEGG Orthology (KO) [BR:
shc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shc03016
]
Shell_1474
Enzymes [BR:
shc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Shell_1474
Transfer RNA biogenesis [BR:
shc03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Shell_1474
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
ADI32562
UniProt:
D7D9W6
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All DBs
Position
1407684..1408205
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AA seq
173 aa
AA seq
DB search
MKYNYIVWFDRSRCIGMVKDKKTINDLEKKWYGRLEGENLVLDIVEIAYLLLQGRIRLAM
EGLEITTYNEFLEKNYSCLKQFFWPKLVVYKDLRDRGRKVRVIDDKKFLVKDKHGDLRLV
VILEEGSKRPVDTIIKDIETAHSNSLELIYAIVSLQGDLTYYEVSKIEPRNER
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacaactatatagtgtggtttgatcgatctcgatgtataggtatggttaaagac
aaaaagaccattaatgatttagagaaaaaatggtatggtaggctggaaggagaaaacttg
gttttagatattgttgagatagcatatctgcttctacaaggtagaatacgcctagctatg
gaaggattagaaataacaacgtataatgagtttttagagaaaaactatagttgcctaaaa
caattcttttggccaaaactagttgtatataaggatctgagggatcgggggagaaaagta
agagttatagatgataagaagtttctggttaaagataagcatggtgatctaagactagtt
gttatattagaggaaggctcaaaaagaccagtagatactattattaaagatattgaaaca
gcacatagtaatagcttagaactcatttatgctattgttagtttgcaaggagatttaaca
tattatgaagtttcaaaaatagagccgaggaatgagcgttga
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