Staphylothermus hellenicus: Shell_1564
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Entry
Shell_1564 CDS
T01249
Name
(GenBank) ABC transporter related protein
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
shc
Staphylothermus hellenicus
Brite
KEGG Orthology (KO) [BR:
shc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shc03009
]
Shell_1564
Ribosome biogenesis [BR:
shc03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
Shell_1564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
Fer4_RLI
Fer4
Fer4_10
Fer4_21
Fer4_6
AAA_23
AAA_15
AAA_22
Fer4_7
Fer4_16
Fer4_2
AAA_29
Fer4_9
Rad17
AAA_24
AAA_14
Fer4_4
Fer4_3
YLR146W-A
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
ADI32652
UniProt:
D7DA56
LinkDB
All DBs
Position
1491041..1492846
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AA seq
601 aa
AA seq
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MVRVAVVDREYCKPNKCNLECIRFCPVNKTKHKKAIELSPDGKHAVIYEDICIGCGICVK
KCPFNAISIVNLPDELEKNVVHRYGENMFKLYNLPIPRLGNIMGIIGRNGSGKTTSIKIL
SGLLKPNLGQVGADLEWDDIIRRFRGTELQTYFAKLANNEIKPIVKIQYVELVKRRLKGR
VGELLKKADERGIVREVVDKLAIKHILDRKTSELSGGELQKFLVAAVLVKDADAYFFDEP
CSYLDVKERLRVAQAIREFIDVSKKYIMVVEHDLMILDYISDQVSIIYGEPGVYGIVSKP
YGVRTGINHYLEGYLPAENMRIRREPIHFRIQVDTRVKPETEYPILKWTNIVKTYRTSGF
KLFIEAGEAYPGEVLGIIGPNGIGKTTFIKLLGGILEPDEGEVLVSVETISFKPQELSPK
IFPEETVAANLRRASPSTLNPASWIYAELIRKLGLNKMLDRYVADLSGGELQKLAVAVAL
AKQADLYLLDEPSAYLDVEERLSVAKVIRRIIEEKRKTAMIVEHDLMLQNFVSDEVIVFS
GKPGVEGYASKPMSNREGFNKLLRELGITVRRDPQSGRPRVNKPGSYLDRQQKSIGQYYM
P
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggttagagtagcagttgttgatcgcgaatactgtaagccgaataaatgtaacttggaa
tgcataaggttttgcccagtaaataagaccaagcataaaaaagcaatagagctatcccct
gatggtaaacatgcagtcatatatgaggatatatgtattggatgtggaatatgtgtcaag
aaatgcccctttaacgctatctcaatagttaacttaccagatgaactcgagaaaaacgtt
gttcaccgttatggagaaaacatgtttaaactatataatctcccaatacctaggctagga
aatataatgggtattatagggcgaaacggtagtggtaaaacaacaagtataaagatattg
tctggtcttctcaaaccaaacctgggccaggttggtgctgatctagaatgggatgatatt
attaggagattcaggggaacagagcttcaaacatattttgccaagttagcaaataatgag
ataaaacctattgtcaagatccaatatgttgaattagttaagagaagattaaaggggaga
gtgggagagcttctaaagaaagctgatgagagaggtattgttagagaagtagtagataag
cttgccataaaacatattcttgatagaaaaacatctgagcttagcgggggagaactacaa
aagttcctggtagcagcagtcttggttaaagatgcagatgcatatttcttcgatgaacca
tgcagttatcttgatgttaaggagagattaagggtggctcaagcaatacgagagtttata
gatgtttctaagaaatacatcatggttgtcgagcatgatctcatgatactggattacata
agtgatcaggtatcgataatatatggtgagccaggtgtttatggaatagtttctaaacct
tacggtgtaagaacaggcataaatcattacttagaaggttatcttccagcagaaaatatg
agaataagaagggaaccaattcatttccgtatacaagtagatactagggtcaagcctgaa
accgaatatcctatattgaaatggaccaatattgttaaaacatatagaacaagcgggttc
aaactatttatagaagctggtgaagcatatccaggagaagtattgggtataataggacct
aatgggataggcaagactacatttatcaaattattaggcgggatactcgaacctgatgaa
ggagaagttttagtatctgttgaaactattagttttaaaccccaagaattatcgccgaag
atttttccagaagaaactgtagctgctaatcttaggagagcttcgcctagcacattaaat
cctgcatcatggatctacgctgagctcataagaaaacttggcttaaacaaaatgcttgac
cgctacgtagctgatctaagcggtggcgagctccaaaaactagcagttgcagttgcgttg
gctaaacaagcagatctatacttgctagatgagccatctgcttatctagacgtggaggag
agactcagtgttgcaaaagttataagaagaataatagaggagaaaaggaaaacagcaatg
attgtcgaacatgacttaatgcttcaaaactttgttagtgatgaagttatagtattctct
ggaaaacccggcgttgaaggatatgcttctaagcctatgagtaatcgtgaaggcttcaat
aaattattaagagagcttggaataactgttagaagggatccgcagagtggtaggcctagg
gttaacaagcccggatcatatcttgataggcaacaaaaatccattggccaatactatatg
ccctag
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