Staphylothermus hellenicus: Shell_1625
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Entry
Shell_1625 CDS
T01249
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
shc
Staphylothermus hellenicus
Pathway
shc03410
Base excision repair
shc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Shell_1625
03430 Mismatch repair
Shell_1625
03440 Homologous recombination
Shell_1625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shc03400
]
Shell_1625
DNA repair and recombination proteins [BR:
shc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Shell_1625
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Shell_1625
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Shell_1625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ADI32710
UniProt:
D7DAB4
LinkDB
All DBs
Position
complement(1544635..1545804)
Genome browser
AA seq
389 aa
AA seq
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MSNTLNEILKTINNYGYVRIVPRIDLDSLIASSILFKNLNEHRVKTSINYDPKTILDQKD
EPTILINLPKTREQPIMFTMNFNMRESVSAYVSYYLDKIYGVSIYDKVLSIATGIYQGLD
TVEGFKGIESEILKELTSKEIIEHEPGFRFWGRLKLDLVNSIYRTLIPFMPGLTGEPEKI
NELLSHAIGGKTGVIKHIHIEQNKDLAARFLEHLLNYLSKIIGASNAKKIIRKILGNVYV
AKINNKVIELNEAVGLLNIYLSLRKNSPQYLSIISVDPNTLFGITTLTDNVIDELIIDIS
IALNQFIKTNQNIFEIEGSIERPEIFIEILRSMDMLPENKAVIMYSDGEYYTSLSELFRV
GREDAETLYAYCDENQLCMVDRDGNIIKT
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaatacattaaatgaaattttaaaaacaataaacaattatggctatgtacggata
gttccaagaatagatctggattcactaatagcttctagcatattgtttaaaaacctaaac
gaacatagggttaaaacaagcataaactatgatcccaaaacaatacttgaccaaaaagac
gaacccacaatattgattaacctgccaaaaacaagggaacaaccaataatgtttacgatg
aattttaatatgagagaaagtgtttctgcatatgtttcatattaccttgacaaaatatat
ggtgtatcaatatatgataaagtattgtctatagcaacaggtatttatcaaggcttagat
actgttgaaggatttaaagggatcgagtcagagattttgaaggagctgactagtaaggaa
attatagaacacgagcctggattcaggttttggggtaggttaaagcttgatctagtaaat
tcaatctatagaacactaataccattcatgccgggattaactggagaaccggaaaaaata
aatgaattattgagccatgctattgggggaaaaacaggggtaattaaacatattcatatc
gaacaaaataaggatctagctgctagatttcttgagcacttactaaattatctaagtaag
attataggtgcttctaatgctaagaaaattattaggaaaatacttggaaacgtatatgtt
gcaaaaatcaataataaagttatcgagttaaacgaagcagtgggattacttaacatatat
ttgtcccttaggaaaaacagtccccaatacctatcaattataagtgttgatccaaatacg
ttatttggaataacaactctaactgataacgttatagatgaattaattattgatatctca
attgccttaaatcaattcattaaaacaaaccagaatattttcgaaatcgaaggaagtatt
gagagacccgagatattcattgaaatattgagatctatggatatgcttcccgaaaacaaa
gctgtcataatgtatagtgatggcgagtactatacaagtttaagcgagcttttccgcgtg
ggcagggaagatgctgagacactatatgcgtactgcgatgaaaaccagttatgcatggtg
gatcgtgatggcaatattatcaaaacttaa
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