Sulfuritalea hydrogenivorans: SUTH_01542
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Entry
SUTH_01542 CDS
T03591
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
shd
Sulfuritalea hydrogenivorans
Pathway
shd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SUTH_01542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shd03019
]
SUTH_01542
03016 Transfer RNA biogenesis [BR:
shd03016
]
SUTH_01542
Enzymes [BR:
shd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SUTH_01542
Messenger RNA biogenesis [BR:
shd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SUTH_01542
Transfer RNA biogenesis [BR:
shd03016
]
Prokaryotic type
tRNA degradation factors
SUTH_01542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
S1_RRP5
KH_2
OB_RRP5_4th
KH_KhpA-B
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
BAO29341
UniProt:
W0SE79
LinkDB
All DBs
Position
1579365..1581482
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AA seq
705 aa
AA seq
DB search
MLNPIKKSFAYGDHTVTLETAEIARQAGGAVMVTMDDTVVLATVVGARNAKPGQDFFPLT
VDYQERSYAAGRIPGGFFKREGRPSEKEILTSRLIDRPLRPLFPDAFYNEVQVVCTVMSC
NPEIDPDIPAMLGASAAMAISGIPFSGPIGAARVGYIDGKYVLCPTKTQLASTQLDLVVA
GTEAAVLMVESEAQQLSEEIMLGAVVFGHDQMQAAIKAINELVEVAGKPEWDWQPPAKDE
PLIARVAELAEAELREAYRITSKQARTIKTREITKKTIAALTEGVENAPDSNLVGNTVFE
LEAKIVRSQILNGEPRIDGRDTRTVRPIVIRNGVLARTHGSALFTRGETQALVVATLGTG
RDEQIIDALQGEYRDRFMLHYNMPPYATGETGRVGTPKRREIGHGRLAKRALLAVLPSPE
EFGYSMRVVSEITESNGSSSMASVCGGSLALMDAGVPLKAHVAGIAMGLIKDGPRFAVLT
DILGDEDHLGDMDFKVAGTESGITALQMDIKIQGITKEIMQVALAQAKDARLHILEKMRV
SMSGHREEVSNFAPRMIHIKINPEKIRDVIGKGGAVIRALTEETGCVIDIEDDGSITISS
VNADAAQVAKKRIEDITAEVEVGRIYEGTVLRLLDFGAIVSLLPGKDGLLHISQIASERV
NAVADYLKEGQLVKVKVIETDDKGRVRLSMKAIAAETPAPAATAE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaatcctatcaagaagagttttgcctacggtgaccacacggtcacccttgagact
gccgaaattgcccgccaggctggcggcgccgtcatggtcaccatggatgacaccgttgtg
ctggcgacggtggttggcgcgcgcaacgccaagccgggacaggattttttcccgctgacc
gtcgattatcaggagcggtcttacgctgccggtcgcattcccggaggtttcttcaagcgt
gaaggccgcccgtcggagaaggaaatcctgacctcgcgcttgatcgaccgcccgttgcgt
ccgctgttccccgatgccttctacaacgaagttcaggtggtttgcaccgtaatgtcatgc
aaccccgaaatcgatccggatatcccggcgatgctcggtgcgtcggcggccatggcgatt
tccggcatcccgttcagcggcccgatcggcgccgcccgcgttggctacatcgacggcaag
tacgtgctgtgcccgaccaagacccaattggcaagcacgcaactcgacctggtggttgcc
ggtaccgaagccgccgtgttgatggtcgagtccgaggcccagcagctttccgaagagatc
atgctcggcgccgtggtgttcggccatgaccagatgcaggccgcgatcaaggccatcaac
gaactggttgaagtcgccggcaagccggagtgggactggcagccgccggccaaggacgag
ccgctgattgcccgcgtggccgaactggcggaagccgaactgcgcgaagcctatcgcatc
accagcaagcaggcccgcacgatcaagacccgtgaaatcaccaagaagaccattgccgca
ttgaccgagggcgtcgaaaacgcaccggattcaaacctggtcggcaacaccgtgttcgaa
ctggaagccaagattgtccgcagccagattctcaacggcgagccccgtatcgacggccgc
gacacgcgcaccgtacggcccatcgtcattcgcaacggcgttttggcgcgcacccacgga
tcggcactatttacgcgcggcgagacgcaagccctggttgtcgccacgctgggtaccggc
cgcgacgagcagatcatcgacgccctgcaaggcgagtaccgcgatcgcttcatgcttcac
tacaacatgcctccctatgccaccggcgagaccggccgcgtcggtacgccgaagcgccgc
gaaatcggccacggccgcctggccaagcgcgcgctgctggccgtgctgccgtcgcccgag
gagttcggctattcgatgcgcgtcgtgtcggaaatcaccgagtccaacggctcgtcgtcg
atggcttccgtctgcggcggctcgctggccctgatggatgccggcgtgccgctcaaggcg
cacgtggcgggcatcgccatgggcctgatcaaggacggccctcgctttgcggtgctgacc
gacatcctgggcgacgaggatcatctcggcgacatggacttcaaggttgcgggcaccgag
agcggtatcactgccctccagatggatatcaagattcagggcatcaccaaggaaatcatg
caggttgcgttggcccaggccaaggacgcgcgtttgcacattctggaaaagatgcgggtt
tcgatgtccggccatcgcgaggaagtttccaactttgccccgcgcatgatccacatcaag
atcaatccggagaagattcgcgacgtgatcggcaagggcggcgcggtgatccgtgcgctg
accgaagaaaccggctgcgtgatcgatatcgaggacgacggttcgatcaccatttcctcg
gtgaatgccgatgcggcacaggtggccaagaagcgtatcgaggacattaccgccgaagtt
gaagtcgggcgcatttatgaaggcacggtgctgcgcctgctggatttcggcgccatcgtc
agcctgctgccgggcaaggacggtctcctgcacatttcgcagattgccagcgagcgcgtg
aatgccgtcgccgactacctgaaggaaggccagttggtgaaggtcaaggtcatcgagacg
gatgacaagggtcgcgttcgtttgtcgatgaaagccattgccgcggaaactccggcaccg
gccgccaccgccgagtaa
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