Sulfuritalea hydrogenivorans: SUTH_01978
Help
Entry
SUTH_01978 CDS
T03591
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
shd
Sulfuritalea hydrogenivorans
Pathway
shd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SUTH_01978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shd03019
]
SUTH_01978
03400 DNA repair and recombination proteins [BR:
shd03400
]
SUTH_01978
Enzymes [BR:
shd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SUTH_01978
Messenger RNA biogenesis [BR:
shd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SUTH_01978
DNA repair and recombination proteins [BR:
shd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SUTH_01978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAO29770
UniProt:
W0SG74
LinkDB
All DBs
Position
2018057..2019883
Genome browser
AA seq
608 aa
AA seq
DB search
MPSPLETLHRVFGYSSFRGPQAEIVDHLIGGGDALVLMPTGGGKSLCYQIPSLLRQGVGV
VVSPLIALMQDQVDALLQAGVRAAFLNSSQDFATASEIERRLRSDELDLIYVAPERLLTD
RFLALMDHLQERNRLALFAIDEAHCVSQWGHDFRPEYIQLSALHQRYPTVPRIALTATAD
QLTRQEIIARLSLDAARVFISSFDRPNIRYTVVERDNPRRQLLDFLARHRGVAGIVYCLS
RKKVDETADWLNEQGIAALPYHAGLDTAVRQNHQQRFLREDGIVMVATIAFGMGIDKPDV
RFVAHLDLPKSLEAYYQETGRAGRDGEPAEAWMTYGLNDVVIHRMRIEESVAGDEQKRVE
RGKLDALLAWCETAACRRALLLRYFSEEAKPCGNCDTCLEPPELWDGTVAAQKAMSAALR
TGQRFGAGHLIDILRGKATEKVRQFGHGELPTFGAGTDLDEAGWRSVFRQLLAAGLLHAD
AQAYGGLRLTDAARPVLKGETTLSLRKQASRVRGGGRQRVHESALATRRSGAEAPMAEAD
APLFEALRAWRADLAREQGVPAYVILHDKSLRELATRRPASLSGLLDVPGIGQAKADRYG
EALLRILT
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgccaagccctcttgaaaccctgcaccgcgtcttcggttattcctcgtttcgcgggccg
caggcggagatcgtcgaccacctgatcggcggcggcgacgcgctggtgctgatgcccacc
ggcggcggcaagtcgctgtgctatcagataccttcgttgctccggcagggcgtcggggtg
gtggtctcaccgctgatcgcgctgatgcaggatcaggtcgatgccctcttgcaagcgggc
gtgcgcgcggccttcctcaattcatcgcaggattttgcgacggcctccgaaatcgaacgg
cggctgcgcagcgatgaactcgacctgatctatgtcgcgccggaacgcctgctgaccgac
cgtttcctggcgctgatggatcacctgcaggaacgcaatcgcctcgccctgttcgccatc
gacgaagcgcattgcgtatcgcaatgggggcacgatttccgtcccgagtacatccagctc
tccgccctgcaccagcgctacccgacggtgccgcgcattgccctgacagccacggcagat
cagctgacgcggcaggagatcatcgcccgcctcagcctcgacgctgcgcgtgtgttcatt
tccagcttcgaccggcccaatatccgctacacagtggtcgaacgcgacaatccccgccgc
caactgctcgattttctggcccggcaccggggcgtcgccggaatcgtgtactgcctgtcg
cgcaagaaagtggacgaaaccgcggactggctcaacgagcagggcattgccgccctgccc
taccacgccggcctcgacacggccgtgcgccaaaaccatcagcagcgtttcctgcgcgag
gacggcatcgtcatggtcgcgaccattgccttcggcatgggcatcgacaagccggacgtg
cgcttcgtcgcccatcttgacctgcccaagagcctcgaagcctactatcaggaaaccgga
cgcgccggccgcgatggcgagccggccgaggcctggatgacctatgggctcaacgacgtg
gtgattcatcgcatgcgcatcgaggaatcggttgccggcgacgagcagaagcgtgtcgag
cgcggcaagcttgatgccttgctggcgtggtgcgaaaccgccgcatgtcgtcgcgccctg
ctgctccggtatttcagcgaggaagccaagccctgcggcaattgcgatacctgcctcgaa
ccgcccgagttgtgggacggcaccgtcgccgcgcagaaagccatgtcggcggccctgcgc
accggccagcgctttggtgcaggtcacctgatcgacatcctgcgcggcaaggccaccgaa
aaggtccggcagttcgggcatggcgagttgccgaccttcggcgctggcaccgatctcgac
gaggccggctggcgctcggtgttccgtcaattgctcgccgccggtttgctgcatgccgat
gcgcaggcctacggcgggctgcgcctgaccgacgcggcgcgcccggtgctgaaaggcgaa
accacgctgtcgttgcgcaagcaggcaagccgtgttcgcggcgggggcaggcagcgagtg
cacgagtcggcgctggcgacacggcgatccggggccgaggcgcccatggcggaggccgat
gcaccgttgttcgaagcactgcgcgcctggcgcgccgatctggcgcgcgagcaaggcgta
cctgcctacgtcatcctgcacgacaagagcctgcgcgaacttgcgacacggcgcccggcc
agcctgtccgggttgctcgatgtgcccggcatcggtcaggccaaggctgaccgctacgga
gaagccctgcttcggatattgacttaa
DBGET
integrated database retrieval system
