Sulfuritalea hydrogenivorans: SUTH_02744
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Entry
SUTH_02744 CDS
T03591
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
shd
Sulfuritalea hydrogenivorans
Pathway
shd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SUTH_02744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shd03019
]
SUTH_02744
Enzymes [BR:
shd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SUTH_02744
Messenger RNA biogenesis [BR:
shd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SUTH_02744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
ERCC3_RAD25_C
AAA_22
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
BAO30523
UniProt:
W0SL64
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All DBs
Position
2840786..2842324
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AA seq
512 aa
AA seq
DB search
MNATTQSTTPSAVDDQDASPAAVPPAPTFDDLGLLPELLRAVKDNGYTHPTPIQTQAIPI
IMAGKDVMGGAQTGTGKTAGFTLPLLQRLARHASSSPSPARHPVRALILAPTRELAMQVH
ESVVTYSKYVPLRSVCIYGGVDIKPQIAELREGREIVVATPGRLLDHVQQKSVSFAAVEV
LVLDEADRMLDMGFIPDIKRILAMLPKERQSLLFSATFSNEIKNLADSMLKAPQLIEVAR
RNAVSETITHRVYPVASDLKRSLLVHLLTHDEEKAKQVLVFVGTKFGASRLAVYLERQGI
AADAIHGDKSQQQRTEALEGFKSGRIRVLVATDVAARGLDIDDLPHVINYELPHTAEDYV
HRIGRTGRAGKQGDATSLFAPEEKQRLADIEKLIKRQIERVEISGFAELASAPPERAPSN
RGHKREHLERAREKARERDRALTLDGNRPAGRELPTPAAHVPRLDPRLPKLDFDPTKPYV
NKPGGAEIAPEKPSPTRPQRPVAALLGGLGKK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgcgactacacagagcacgaccccttccgccgtcgacgaccaggacgccagcccg
gccgccgtcccgccagcgccgaccttcgacgacctcgggctgctgcccgagttgctgcgt
gccgtgaaggacaacggctacacgcacccgaccccgatccagacccaggccatccccatc
atcatggccggcaaggatgtcatgggcggcgcccagaccggtaccggcaagacggccggc
ttcaccctgccgctgctgcaacggctggcgcgccatgccagcagttcgccctcgcctgcg
cgccatccggtgcgcgcgctgatcctggcgccgacgcgcgaactggccatgcaggtgcat
gaaagcgtggtcacctacagcaagtacgtgccgttgcgctcggtctgcatttacggcggc
gtggatatcaagccgcagatcgccgaactgcgcgaaggccgcgagatcgtggtcgccacg
ccgggccgcctgctcgaccacgtgcagcaaaagagcgtgtccttcgccgcggtcgaggtg
ctggtgctcgacgaggccgaccgcatgctggacatgggcttcatccccgacatcaagcgc
atcctcgcaatgctgccgaaagagcgccagagcctgctgttctcggccaccttctccaac
gagatcaagaatctcgccgacagcatgctcaaggcaccgcaactgatcgaagtcgcgcgc
cgcaatgccgtcagcgagaccatcacccatcgcgtttatcccgtggcctccgacctcaag
cgcagcctgctggtgcacctcctgacccacgacgaggagaaggccaagcaggtgctggtc
ttcgtcggcaccaagttcggcgccagccggctggccgtgtacctcgaacgccagggcatc
gccgccgacgccatccacggcgacaaaagccagcagcagcgcaccgaagcgctcgaaggc
ttcaagtcgggcaggatccgcgtgctggtcgccaccgatgtcgccgcgcgcggcctcgac
atcgacgacctgccgcatgtcatcaactacgaattgccacacaccgccgaggactacgtg
catcgcatcggccgcaccggtcgcgccggcaagcagggcgacgccacttccctgttcgcc
cccgaggaaaagcagcggctggccgacatcgaaaagctgatcaagcgccagatcgagcgc
gtcgagatcagcggcttcgccgagctggcttccgcgccgcccgagcgtgcgccgagcaat
cgcggccacaagcgcgagcacctcgagcgcgcccgcgagaaagcgcgcgagcgcgatcgc
gcgctgacgctggacggcaaccggccggccgggcgcgaactgcccacccccgccgcccac
gtgccgcgactcgacccgcgcctgcccaagctcgacttcgatccgaccaagccctatgtc
aacaaacctggcggtgccgaaatcgctcccgagaaaccgtcgccgacgcgcccgcagcgg
ccggtcgccgcactgctcggcggcctggggaaaaagtag
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