Sulfuritalea hydrogenivorans: SUTH_03209
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Entry
SUTH_03209 CDS
T03591
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
shd
Sulfuritalea hydrogenivorans
Pathway
shd03030
DNA replication
shd03430
Mismatch repair
shd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SUTH_03209
03430 Mismatch repair
SUTH_03209
03440 Homologous recombination
SUTH_03209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shd03032
]
SUTH_03209
03400 DNA repair and recombination proteins [BR:
shd03400
]
SUTH_03209
Enzymes [BR:
shd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SUTH_03209
DNA replication proteins [BR:
shd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SUTH_03209
DNA repair and recombination proteins [BR:
shd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SUTH_03209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
SPO11_like
Hydrolase
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BAO30982
UniProt:
W0SJ18
LinkDB
All DBs
Position
complement(3354777..3358223)
Genome browser
AA seq
1148 aa
AA seq
DB search
MSAPPLPGFVHLRLHSEYSITDGLTRIDEVIARAAADGQPALAITDLANLFGMVKFYTAA
RGKGIKPIIGCDVWIGDEDAAEKNDGPARLLLLAKNRGGYLRLCELLSAAYLAPRRHGRA
EITRTQLAQGDNSGLIALSGGPLGDIGQLLAAGKLDQADVRAQAWARLFPGSYYIEVQRP
GGRDGAAANEVLVAASVDLAARLGLPLVATHPVQFLDRDDFKAHEARVCIADGYVLGDTR
RPKKYSPEQYFKTQAEMAELFADLPEALQNSAEIARRCNLTVELGKSRLPDFPTPAGEPL
EAFLASESHAGLERRLQLLYPDSAEREKQRPTYVARLDFEIATIVKMGFPGYFLIVADFI
RWAKNNGVPVGPGRGSGAGSLVAYSLDITDLDPLRYDLLFERFLNPERVSMPDFDIDFCQ
EGRDRVIDYVKKKYGAHAVSQIVTFGTLAAKAVIRDVGRVLDLGFNFVDQFAKLIPNELG
ITLKDALDKEPAIRARIDSEEEVAELWALALKLEGLTRNVGMHAGGVLIAPGKLTDFCPL
YAAAGAESVVSQFDKDDVEKAGLVKFDFLGLRTLTILDEAVRLAKEVEGVEIDLATLSLD
DRETYDAVFKSANTTAVFQFESGGMKDTLIKAKPDCLEDLIALNALYRPGPMDFIPDFIN
RKHGTRFEYPHPCLEPVLANTYGIMVYQEQVMQTAQVAAGYSLGGADLLRRAMGKKKPEE
MAQQREIFVKGAAANAINEIKANEIFDTMEKFAGYGFNKSHAAAYSLVAYHTGWLKRHHP
AAFVSATLSSEMGNTDKLQFFYKDAIDNGLVFLPPDINHGSIRFRPVDGKTIRYGLGAIK
GTGEAALSVILKARESGGAFTDLFDFCRRIDKRVVNRRVIEALIRAGAFDAIDDHRAKLL
ASTGVALEAAEQAERNAMQGGLFDTGAQADTAHYVDVPRWNEREQLMNEKPALGFFFSGH
PYHAYATELGAFVKRRLGQLEAQREPVLLAGVVMSTRTQMTRRGKMAVVALDDGTTQLEV
TVFNELWEAERAKIKEDELLLVEGKVQKDDYSGGLRITADKLYTLAEARGRYARGLRLTM
NGGSDAKRLQALLAPFRNGPCPVRLSYRNGDAVAELPLPETWRVRLDDALLAGLADWLKP
ENVKVIYQ
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccccgcctcttcccggcttcgtccatctccggcttcacagcgaatactcgatc
accgatggcctgacgcgcatcgatgaggttatcgcccgggcggcggccgacggccagccg
gcgctggcgatcaccgacctggccaacctgttcggcatggtcaagttctacactgcggcg
cgcggcaagggcatcaagccgatcatcggctgcgatgtctggatcggcgacgaggatgcg
gctgaaaagaacgacggcccggcgcgcctgctgctgctggcgaagaatcgcggcggttat
ttgcgcctgtgcgaactgctctccgccgcctatctggcgccgcgccgccacggccgcgcc
gaaatcacccgcacgcaactcgcgcagggcgacaacagcggcctgatcgcgctgtcgggc
ggcccgctgggcgacatcggacaactgctcgcggccggcaagctggatcaggccgacgtg
cgcgcgcaggcctgggcacggctgttccccggcagctactacatcgaggtgcagcgcccc
ggtggccgcgacggcgcggcggccaatgaagtgctggtcgcggccagcgtcgatctggcg
gcgcgcctcggcctgccgctggtggcgacgcacccggtgcagttcctggatcgcgacgac
ttcaaggcgcacgaggcgcgggtctgcatcgccgacggctatgtgctgggcgacacgcgg
cggccgaaaaagtacagtcccgagcagtacttcaagacccaggccgagatggccgaactc
ttcgccgacctgcccgaggccttgcagaactcggcggaaatcgcccgccgctgcaacctc
acggtggaactgggcaagagccgcctgccggatttcccgacgcccgccggcgagccgctg
gaagccttcctcgccagcgagtcgcatgccggcctggaacgccgcctgcaactgctctac
cccgattccgccgagcgcgagaagcagcgtccgacctatgtcgcgcgcctcgatttcgag
atcgccaccatcgtcaagatgggcttccccggctacttcctgatcgttgccgacttcatc
cgctgggcgaagaacaacggcgtgccggtgggccccgggcgcggctcgggggcgggctcg
ctggtggcctacagcctcgacatcaccgacctcgatccgctgcgctacgacctgctgttc
gagcgcttcctcaatccggaacgcgtctcgatgcccgacttcgacatcgatttctgccag
gaaggccgcgatcgcgtcatcgattacgtcaagaagaaatacggcgcgcacgccgtgtcg
cagatcgtcaccttcggcacgctggcggccaaggcggtgatccgcgacgtcggccgggtg
ctcgatctcggcttcaacttcgtcgaccagttcgccaagctgattcccaatgagctcggc
atcacgctcaaggatgcgctcgacaaggagccggcgatccgcgcgcgcatcgacagcgag
gaggaagttgccgagctctgggcgctggcgctgaagctcgaaggcctcactcgcaacgtc
ggcatgcatgccggcggcgtattgatcgcgccgggcaagctcaccgatttctgtccgctc
tacgcggcggccggcgccgagtcggtggtctcgcagttcgacaaggacgacgtggagaag
gccggcctggtcaagttcgacttcctcggcctgcgcacgctgaccatcctcgacgaggcg
gtgcggctggcgaaggaggtagagggtgttgagatcgacctcgcgaccctgtcgctcgac
gaccgcgaaacctacgatgcggtgttcaagagcgccaacaccacggcggtgttccagttc
gaatccggcggcatgaaggacaccctgatcaaggccaaaccggattgcctggaagacctg
atcgcactgaatgcgctgtaccggccggggccgatggatttcatccccgacttcatcaat
cgcaagcacggcacgcgtttcgagtatccgcatccctgcctggagccggtgctggccaac
acctacggcatcatggtgtaccaggagcaggtgatgcagaccgcacaggtggcggccggc
tacagcctgggcggcgccgacctgctgcgccgcgcgatgggcaagaagaagcccgaggaa
atggcccagcagcgcgagattttcgtcaagggcgcggccgcgaacgcgatcaatgaaatc
aaggccaacgaaatcttcgacaccatggagaagttcgccggctacggcttcaacaagtcg
catgccgccgcttattcactggtggcctatcacaccggctggctcaagcgccatcatccg
gcggcatttgtctcggcgacgctgtcgtctgaaatgggcaatacagacaagctgcagttc
ttctacaaggacgccatcgacaacggcctcgtcttcctgccgcccgacatcaaccacggc
agcatccgcttccggccggtggatggcaagaccatccgctacggcctgggcgccatcaag
ggcaccggcgaggcggcgttgtcggtgatcctcaaggcgcgcgaaagcgggggtgcgttc
accgacctcttcgatttctgccgccgcatcgacaagcgcgtggtgaaccggcgcgtgatc
gaggcgctgatccgcgccggcgccttcgacgcgatcgacgaccaccgcgccaagctgctg
gcctcgaccggcgtcgccctcgaagcggcggaacaggccgaacgcaatgccatgcagggc
ggactgttcgatacgggagcgcaggccgacaccgcgcactatgtcgatgtgccgcgctgg
aacgaacgcgaacagctgatgaacgaaaagccggcgctgggcttcttcttctccggccat
ccctatcacgcctacgccaccgagctgggcgccttcgtcaagcgccgcctcggccagctc
gaagcgcagcgcgagccggtattgctggcgggcgtcgtgatgtccacccgtacccagatg
acccgtcgcggcaagatggccgtggtggccctcgacgacggcaccacccagctcgaagta
accgtgttcaacgaactgtgggaagccgagcgcgccaagatcaaggaagacgaactgctg
ctggtcgaaggcaaggtgcagaaggacgactacagcggcggcctgcgcatcaccgccgac
aagctctacaccctggccgaggcgcgcggccgctacgcgcgcggcctgcgcctgaccatg
aacggcggttccgacgccaaacgcctgcaggcgctgctggcgccgtttcgcaacggcccc
tgcccggtgcggctctcctatcgcaatggcgatgccgtggcggaactccccttgccggag
acctggcgcgtcaggctcgacgatgccctgctggccgggctcgccgactggctcaagccg
gagaacgtgaaagtgatctaccagtga
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