Sulfuritalea hydrogenivorans: SUTH_03227
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Entry
SUTH_03227 CDS
T03591
Symbol
uvrD
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shd
Sulfuritalea hydrogenivorans
Pathway
shd03420
Nucleotide excision repair
shd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SUTH_03227 (uvrD)
03430 Mismatch repair
SUTH_03227 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shd03400
]
SUTH_03227 (uvrD)
Enzymes [BR:
shd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SUTH_03227 (uvrD)
DNA repair and recombination proteins [BR:
shd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SUTH_03227 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SUTH_03227 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
DUF3553
Motif
Other DBs
NCBI-ProteinID:
BAO31000
UniProt:
W0SJY0
LinkDB
All DBs
Position
complement(3377595..3379766)
Genome browser
AA seq
723 aa
AA seq
DB search
MNPLLDHLNAPQLAAVTLPPAHALILAGAGSGKTRVLTTRIAWLISTGQVAPPGVLAVTF
TNKAAKEMQTRLAAMLPINVKGMWIGTFHGLCNRLLRAHYRDAGLPQLFQILDSADQQAS
VKRLLKSLNVDDEKFPPRELCHFINAQKEQGLRAAAVEAYDDWARKRVALYEAYEAQCQR
EGVVDFAELLLRSYELLERNEPLRRHYQERFRHILVDEFQDTNKLQYRWLKLLAGGGANL
FCVGDDDQSIYAFRGADVGNMADFEREFKVQNLIRLEQNYRSEGNILDAANAIIRNNPTR
LGKNLWTEAGSGEPIRIYESYSDGDEARWIVEEIKALSRDGHARAEIALLYRSNAQSRAL
EHALFNAGLPYRVYGGLRFFERAEIKHALAYLRLIANTDDDTAFARVVNFPARGIGARSL
ENLQDAAKAANSSLHAAIPQVAGAGGVKLAGFAQLIVKLHEAAHLPLPELVDHVIELSGL
RAHYKNEKEGQERLDNLDELINAAASFVAEEGTPNQDGEITGEFGNDLSSFLAHASLEAG
EHQAGEGDDALQLMTVHSAKGLEFNVVFISGLEDGLFPHENSMSEDKGLEEERRLMYVAV
TRARQRLYLSFAQTRMLHGQTRYNLPSRFLDEVPEELVKWLTPRAGKGGFAVSSAPTYPA
TPRRSESSGGSGFRIGQSVMHAKFGLGVIVNAEGSGTDARVQVNFGHAGMKWLALSVAKL
EAA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccctgcttgaccatctcaatgccccgcaactggcggccgtcaccctgccgccc
gcgcatgccctgatcctcgccggcgccggctcgggcaagacgcgggtgctgacgacgcgc
atcgcctggctgatttcgaccggtcaggttgcgccgcccggcgtgctggccgtgactttc
accaacaaggccgccaaggaaatgcagacgcggctcgccgcgatgctgccgatcaatgtc
aagggcatgtggatcggcacctttcacggcctgtgcaaccgcctgctgcgcgcccattac
cgcgatgccggcctgccgcagttgttccagatactcgactccgccgaccagcaggcttcg
gtcaagcgcctgctgaaatcgctcaacgtcgatgacgaaaaatttccgccgcgcgagctg
tgccatttcatcaatgcgcagaaggagcagggcctgcgcgccgccgccgtcgaagcgtat
gacgactgggcgcgcaaacgcgtcgcgctttacgaagcctacgaggcgcaatgccaacgc
gaaggcgtggtcgatttcgccgagctgctgctgcgttcctatgaactgctggagcgcaac
gaacccttgcgccggcattaccaggagcgcttccgccacatccttgtagatgaattccag
gacaccaacaagctgcagtaccgctggctgaagctgctggccggtggcggcgcgaacctc
ttctgcgtcggcgacgacgaccagtcgatctacgccttccgcggcgccgacgtcggcaac
atggccgacttcgagcgcgagttcaaggtgcaaaacctgatccgcctcgaacagaactac
cgctcggaaggcaacatcctcgacgctgccaacgccatcatcaggaacaatcccacgcgc
ctgggcaagaacctgtggaccgaggccggcagcggcgagccgatccgcatctacgaatcc
tattccgacggcgacgaagcgcgctggatcgtcgaagaaatcaaggccctgtcgcgcgac
ggccatgcccgcgccgaaatcgcgctgctctatcgcagcaacgcgcagtcgcgggcgctc
gagcatgcgctgttcaacgccggcctgccctatcgcgtgtatggcggcctgcgctttttc
gagcgcgccgagatcaagcacgcactggcctacctgcgcctgatcgccaacaccgacgac
gacacggcatttgcccgcgtggtgaatttccccgcgcgcggcatcggcgcgcgcagcctg
gaaaacctgcaggacgcggcgaaggcggccaacagcagcctgcatgcggcgattccgcag
gtcgccggcgccggaggcgtcaagctggccggcttcgcgcaactgatcgtcaagctgcac
gaggcggcacatctgccgctgccggagctggtcgatcacgtcatcgaactctccggcctt
cgcgcccactacaagaacgagaaggaaggccaggagcggctggacaacctcgacgaactg
atcaacgccgcggcgagtttcgtcgccgaagagggcacgcccaaccaggacggcgaaatc
accggtgagttcggcaacgacctctcctcctttctcgcccatgcctcgctcgaagccggc
gagcaccaggccggcgaaggcgacgacgcgctgcaactgatgaccgtgcattcggccaag
ggcctcgaattcaacgtcgtcttcatcagcggtctcgaagacggcctgttcccgcatgag
aattcgatgtccgaagacaaaggactggaagaagagcggcgcctgatgtacgtcgccgtc
acccgcgcgcggcagcggctctacctgagtttcgcgcagacgcgcatgctgcacggccag
acgcgctacaacctgccgtcacgcttcctcgacgaggtgccggaggaactggtcaagtgg
ctcacaccgcgcgcgggcaagggcggcttcgccgtatcgtcagcgccgacttatcccgcc
acgccgcgccgcagcgagtcttcgggcggcagcggcttccgcatcggccagagcgtgatg
catgcaaaattcggcctcggcgtcatcgtcaatgccgaaggcagcggcaccgatgcccgc
gtgcaagtcaatttcggccatgccggcatgaagtggctggccttgtccgtggcaaaactg
gaggcagcatga
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