Shewanella sp. MR-4: Shewmr4_0001
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Entry
Shewmr4_0001 CDS
T00388
Name
(GenBank) chromosomal replication initiator protein DnaA
KO
K02313
chromosomal replication initiator protein
Organism
she
Shewanella sp. MR-4
Pathway
she02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
she00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shewmr4_0001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
she03032
]
Shewmr4_0001
03036 Chromosome and associated proteins [BR:
she03036
]
Shewmr4_0001
DNA replication proteins [BR:
she03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Shewmr4_0001
Chromosome and associated proteins [BR:
she03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Shewmr4_0001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DnaA
Bac_DnaA_C
DnaA_N
Hda_lid
IstB_IS21
AAA
AAA_14
AAA_22
Kinesin
AAA_16
ATPase_2
AFG1_ATPase
AAA_19
KAP_NTPase
NACHT
Motif
Other DBs
NCBI-ProteinID:
ABI37083
UniProt:
Q0HPD4
LinkDB
All DBs
Position
79..1461
Genome browser
AA seq
460 aa
AA seq
DB search
MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGDTLVLYAPNRFVLDWVRDKYINIIN
QFFTEQMGNDAPKLRFDIGSRPSAKKPEPAPVAAVRVPNPQTKASVGTSFNTTEPVANTN
HRSNINPTYQFDNFVEGKSNQLGKAAALQVAENPGGAYNPLFLYGGTGLGKTHLLHAVGN
GIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRSQ
EEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAILM
RKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDLL
ALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQVAMALSKELTNQSLPEIGD
AFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcggtttcactttggcaacaatgtatcggaagactgcaagacgagctttctgctcag
cagttcagtatgtggatcagaccgttacaagccgaaatggatggagatactttggtgctt
tatgcgcctaaccgcttcgtgctcgattgggttagggataaatacatcaacatcattaat
cagttttttactgagcaaatgggtaatgatgcacctaagttacgcttcgatatcggtagc
cgtccgtcagcgaaaaagcctgagccagcacctgttgcggctgtgcgtgtgcctaatccc
caaaccaaagcctcagtagggacttcatttaatactactgagcctgttgccaataccaat
catcgcagcaatatcaatcccacttaccaattcgataacttcgtcgagggtaagtctaac
caacttggcaaagcggccgcactacaagtggctgaaaatccaggtggtgcctataaccca
ctgttcctttatggcggtacgggtttaggtaagacccacttattacatgctgtgggtaat
ggcatcattaaaaataatcctaatgccaaggtggtttacatgcattccgagcgttttgtg
caagacatggtcaaagcgctacaaaacaatgcgatcgaagaattcaaacgttactaccgt
agtgtcgatgcgctgtttatcgacgatattcaattctttgccaataaagacagatcgcag
gaagaatttttccatacctttaacgcgttgcttgaaggtaatcatcagatcatcctgaca
tcggatcgttatcctaaagagatcgacggggtagaggacagattaaaatctcgtttcggt
tggggcttaacggttgcgattgagccgccagagctcgaaacccgtgtggcgattttgatg
cgtaaagcccaggagagtggtatcaatctccccgacgaagtcgccttctttattgctaag
cgcttacgttcaaacgttcgcgagttagaaggggcgttaaaccgcgtgatcgccaacgct
aactttactggccgcccaataacgattgattttgtgcgtgaagccctgcgtgacctcttg
gcactgcaggaaaaattagtcactatagacaacattcagaaaaccgtagctgaatactac
aaaatcaagatggctgatatgttgtctaagcgtcgttcgcgcagtgttgcgcgccctaga
caagtggccatggcgttatccaaagaattaactaaccagagcttgccggaaattggtgat
gcctttggtggtcgagatcacaccacagtgttacatgcctgtcgtaagattgctcagcta
cgggaagagagtcacgacattaaagaagattatgctaacttgattagaaccttatcttct
taa
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