Shewanella sp. MR-4: Shewmr4_0178
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Entry
Shewmr4_0178 CDS
T00388
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
she03016
]
Shewmr4_0178
Enzymes [BR:
she01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
Shewmr4_0178
Transfer RNA biogenesis [BR:
she03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
Shewmr4_0178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_4
Methyltransf_25
Methyltransf_15
PrmA
Methyltransf_31
MTS
Methyltransf_11
TRM5-TYW2_MTfase
DREV
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
ABI37259
UniProt:
Q0HNV8
LinkDB
All DBs
Position
complement(198779..199876)
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AA seq
365 aa
AA seq
DB search
MNLAAMDPTTYDAQLTAKRIKLEQAFAQFETPSVEVFASEPAHYRMRAEFRIWHEGDDLY
YYMFDKVLNDKVRCDQYLPASALINQMMAALIAELKPNHSLRHKLFQVDFLSTLSGEILV
SLLYHRQLDDQWRSEAAALKARLSSQFKVNIIGRARKQKIDLDKDFVVESLQVNDKVFHY
KQIENSFTQPNAKVAIKMLEWAIDVTQHSQGDLLELYCGNGNFSIALAQNFNRVLATELA
KPSVDAAQYNIEVNNIDNLQIIRMSAEEFSDAMAKKRSFRRLEGIDLDSYVCNTIFVDPP
RAGIDPATLELVQGYERILYISCNPDTLKDNLQQLNQTHKVTRFALFDQFPYTDHMETGV
LLERR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagcagcaatggatcccacgacctatgatgcgcaattaactgcaaagcgtatc
aagctagagcaggcctttgcccaatttgagacaccgagtgttgaagtgtttgcctcagaa
cctgcccactatcggatgcgcgccgagtttcgcatatggcacgagggcgacgatttatac
tattacatgttcgataaagtattgaacgacaaagttcgttgcgatcaatacttacccgcg
agtgccttaatcaatcagatgatggcggctctgatcgccgagttaaaaccgaaccacagc
ctacgccataaactcttccaggttgattttttatcaacgctcagtggtgagattttagtg
tcactgttgtatcacagacagcttgatgatcaatggcgcagcgaagccgccgcacttaaa
gccagattgagcagccaatttaaggtcaatatcattggtcgtgcgcgcaaacagaaaatc
gatttagataaagactttgtggttgagtcactgcaagtgaatgacaaagttttccattac
aaacaaatcgaaaacagctttacccagccaaatgccaaggtagcaatcaagatgctggaa
tgggctatcgacgtgactcaacacagccaaggcgatttactggagctttactgtggtaat
ggcaacttctccatcgcgctggcacaaaactttaatcgcgtgctcgcaaccgagttggct
aaaccctcagtggatgctgctcagtacaatatcgaagtcaacaatatcgataatctgcag
attatccgtatgtcggcggaagaatttagcgatgcgatggctaaaaagcgcagctttaga
cgcttagaaggcatagatctggatagctatgtctgcaacaccatttttgtcgacccacca
cgagcaggtatcgaccctgcgacgttggagttagtgcaaggttatgagcggatcctgtat
atctcttgtaatcccgacaccttgaaagacaatttgcagcaattaaatcagacccataaa
gtcacccgttttgccctgttcgatcagttcccttataccgatcatatggaaacaggtgta
ctgcttgagcgtcgttaa
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