Shewanella sp. MR-4: Shewmr4_0286
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Entry
Shewmr4_0286 CDS
T00388
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_0286
Transporters [BR:
she02000
]
Other transporters
Pores ion channels [TC:
1
]
Shewmr4_0286
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABI37366
LinkDB
All DBs
Position
complement(305325..307496)
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AA seq
723 aa
AA seq
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MTFKTSFVALAVFAALTQSAVAQEAPDTGTNKNKDIEKITVTASRMDKSPSSIPNTVTII
DRVQLEEQFRTTKDLSTIIGNLAPSFSPSRQKMSNTGETLRGRPPLIMIDGVPQSNPLRS
GGRSGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYITKKPTGDNQHVVSFDVTVPDSL
KSNGVSFGASYAFSGESELIDMLGSVSYRNNGVYYDANHDVIGVDTTQGESMDSQSKDFF
IKLGHNFAESRLELMVNHYNMENNGDWMPVKGDITTGKPTGAIEEKQPWEAANNQVTTTS
LTYTHENIAGQQLSIQLFNQDFEAVYGGGCNKTFYDPAFANNDNLVQCEGPKGESWYYEQ
SRNSSVKWGLKTSLIAKNIADTGIDAAYGIDLFRDTTEQDLVQTGLSWVPESTYDNFAPY
LQLDYDLITDLTLSTGVRYEHAKLNVDDYKTLYGAGNKQIEGGEASFDETLFNIGISYKI
TPDIRVYTSYNQGFGMPDIGRILRDGNSFPGANPSISDSLSLAPIVTDNVEFGADYQGEY
LSAKIAYYRSATDYGARLALNSDGFYDVKREKSVIDGIEANITAYLTSNDDLGMNLAIQR
GEYDSNDDNNTDTDLDGANISPNRINLFWTHNFDNEMSTRVQANYFMDRDFEDATGEKYA
EFNGYTTVDASFSMPLYTGTLTLGVQNLFNKDYFNYYSQTMGTNDRYFKGMGRTATIGYT
VAF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcaaaacctcgtttgttgccctcgccgtatttgccgccctcacccaatccgca
gtggctcaagaagccccagatacgggaacgaataagaataaagacatcgaaaagatcact
gtcaccgcgagccgcatggataaatcgccaagctccattcccaatacagtgaccattatc
gaccgcgtgcaactcgaagagcagttccgcaccactaaagatttgtcgactattatcggt
aacttagcacctagcttttcacccagccgtcagaagatgagcaacacgggcgaaaccctg
cgtggccgcccgccattaatcatgatcgatggagtgccccaatccaacccgctgcgtagt
ggtggtcgttcgggacaaactatcgaccctgcgatgatcgagcgtatcgaaattatccac
ggtgccaatgcgatgcacggcttaggcgcacagggcggtatcatcaactacatcaccaaa
aaaccaacgggcgataaccaacacgtcgtcagtttcgatgttactgtgcccgactcgctc
aaatcgaacggtgtaagttttggtgcaagctatgcgttttcgggcgaatccgagctgatc
gatatgttgggctcggtgagctaccgtaataacggcgtgtactacgatgcaaaccacgat
gtgattggggtggacacgacgcaaggcgagtccatggacagccagagcaaagacttcttt
atcaaactcggccacaattttgccgagtcgcgcttagagctgatggttaaccattacaac
atggagaacaacggcgattggatgccagtgaaaggcgatataaccactggcaaaccaacg
ggcgcaatcgaagaaaaacaaccttgggaagcggctaacaaccaagtcacgacgactagc
ctcacttacacccacgagaatattgcaggtcaacagctgagtattcagttgtttaatcaa
gattttgaggccgtgtatggcggtggctgtaacaagactttctacgatcctgcatttgcc
aataacgacaacctagtacaatgcgaaggccctaaaggcgagagttggtactatgagcaa
tcgcgtaactcttcggtcaaatggggattaaagacctcgttaattgccaaaaatattgcc
gatacgggtatcgacgccgcctatggtatcgacctgttccgcgataccacagagcaggat
ttagtacagacgggtctgtcgtgggtgcctgaaagcacctatgacaacttcgcgccctat
ttgcagttagattatgatttaattaccgatctaaccctatcgaccggcgtacgctacgag
cacgctaagctcaatgtcgatgactacaagacactctacggcgcgggaaataaacaaatt
gaagggggcgaagcgagtttcgacgagaccctattcaacataggtatctcctacaaaatc
actccagatatccgcgtttacactagttataaccaaggttttggtatgccagatatcggc
cgcattctgcgcgacggtaacagcttccctggcgccaatcctagcattagcgactctcta
tcccttgcaccgattgtgacggataacgtggagtttggcgccgattatcaaggagaatac
ttaagcgctaagattgcctactatcgttcggcaacggattacggtgcgcgtttagcctta
aacagcgacggcttctacgatgtcaaacgtgagaagagcgtgatcgatggtatcgaagcc
aatatcaccgcctacctgaccagcaacgacgatctgggcatgaatttagcgattcagcgc
ggtgaatatgattcgaatgatgacaacaacacagataccgatctcgatggtgccaacatt
tcaccgaatcgtatcaacctgttctggacccataatttcgataacgagatgtcgacgcgc
gtacaggcaaactactttatggaccgtgatttcgaagatgccacaggcgagaaatatgcc
gagtttaatggctacaccactgtcgatgcgtcattctcaatgccgctctacactggcacc
ttaaccttaggcgtgcaaaacctgtttaataaggattatttcaactactactcacaaact
atgggtaccaatgatcgttatttcaaaggcatgggtcgtaccgctactatcggctataca
gtcgcattttaa
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