Shewanella sp. MR-4: Shewmr4_0437
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Entry
Shewmr4_0437 CDS
T00388
Name
(GenBank) aconitase
KO
K01682
aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
she
Shewanella sp. MR-4
Pathway
she00020
Citrate cycle (TCA cycle)
she00630
Glyoxylate and dicarboxylate metabolism
she00640
Propanoate metabolism
she00720
Other carbon fixation pathways
she01100
Metabolic pathways
she01110
Biosynthesis of secondary metabolites
she01120
Microbial metabolism in diverse environments
she01200
Carbon metabolism
she01210
2-Oxocarboxylic acid metabolism
she01230
Biosynthesis of amino acids
Module
she_M00009
Citrate cycle (TCA cycle, Krebs cycle)
she_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
she_M00012
Glyoxylate cycle
she_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Shewmr4_0437
00630 Glyoxylate and dicarboxylate metabolism
Shewmr4_0437
00640 Propanoate metabolism
Shewmr4_0437
09102 Energy metabolism
00720 Other carbon fixation pathways
Shewmr4_0437
Enzymes [BR:
she01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
Shewmr4_0437
4.2.1.99 2-methylisocitrate dehydratase
Shewmr4_0437
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aconitase_2_N
Aconitase_B_N
Aconitase
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
ABI37517
LinkDB
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Position
493650..496322
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AA seq
890 aa
AA seq
DB search
MSDCQLQLRRRAVSLLERQTKRNVAVLEAYRKHVAERAAEGVVPKPLDAHQVAELVKLVQ
NPPAGEEAVILDLLENRIPPGVDEAAYVKAAFLDAVAKGTATSPILSAERATELLGTMQG
GYNIEPLIAQLDNPALAPLAVKALSHTLLMFDSFHDVVEKMEAGNAYAKQVVEAWANADW
YLSRPKLADKVTLTVFKVSGETNTDDLSPAPDAWSRPDIPLHALAMLKNARDGIEPDVPG
SVGPIKKLEELKTKGFPLVYVGDVVGTGSSRKSATNSVLWFMGDDIPFVPNKRAGGFCLG
GKIAPIFFNTMEDAGALPIELDVSKMEMGDVIDIYPYAGVVKRHGTEEVISEFSLKTDVL
LDEVRAGGRIPLIIGRGLTDKARAVLGLPASEVFVRPQDIADSGKGYTLAQKMVGKACGV
AGVRPGQYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLTMQSFCHTAAYPKPVDVN
THHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLV
AFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLKAIEMGLLTVEKKGKVNIFS
GRVLEIEGLETLKVEQAFELSDASAERSAAGCTIKLDKEPIIEYLNSNITMLKWMIAEGY
GDRRTIERRIKGMEEWLANPELMSADADAEYAAVIEIDLNEIKEPILCAPNDPDDAVLLS
SVAQTKIDEVFVGSCMTNIGHFRATGKMLDKFAKTLPTRLWIAPPTKMDKDQLTEEGYYG
IFGRVGARIEIPGCSLCMGNQARVAEGSTVVSTSTRNFPNRLGTGANVYLASAELAAVAA
LLGRLPSVEEYQEYAKELDATAADTYRYLNFDQIDSYTQKASQVIFQSAV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactgtcagcttcaattgagaagacgtgcagtttcgttgttagagcgccaaaca
aagaggaatgttgccgtgctagaagcatatcgtaaacacgtcgcagaacgtgctgcagag
ggcgtagtccctaagccattagatgcacatcaagtggctgaactggttaaattggttcaa
aatccccccgctggtgaagaagccgttattcttgacctgctagaaaatcgaattcccccc
ggtgttgacgaagctgcttacgtaaaagccgctttcttagatgcggttgctaaaggcact
gcaacttcacctatcctgtctgccgaacgtgcgactgagttattaggcaccatgcaaggt
ggctataacatcgagccgctgatcgctcagttagataatccagctctggcaccattagcc
gttaaagcactgtctcacactctgctgatgtttgattctttccacgatgtggttgagaaa
atggaagcgggtaacgcctatgctaaacaagtggttgaagcttgggcaaatgcagactgg
tacttaagccgtccaaaattagcggacaaagtgactctgacagtattcaaagtctcaggt
gaaaccaacaccgacgacctgtcaccggctcctgatgcttggtcacgtccagatatcccg
ttgcacgccttagctatgctgaaaaacgcgcgtgatggtatcgagccagatgtaccaggc
agcgtaggtccaatcaagaaattagaagaactgaaaaccaaaggtttcccattagtttac
gtgggtgacgttgtaggtacaggctcatcacgtaagtcagcgactaactcagtactgtgg
ttcatgggcgatgatatcccattcgtacctaacaaacgtgctggtggtttctgcttaggt
ggcaagattgctccgattttcttcaacactatggaagatgcgggcgcgctgccaatcgaa
cttgacgtcagcaaaatggaaatgggcgatgtaatcgacatttatccatacgctggtgtt
gttaagcgtcatggcacagaggaagtcatttctgagttcagcctgaaaaccgacgtattg
ttagacgaagtgcgtgcgggtggccgtattccactgatcatcggtcgtggtttaactgac
aaagctcgcgcagtattaggtttacctgcttctgaagtattcgtacgtccacaggatatc
gctgattctggcaaaggttacacccttgcgcagaagatggttggtaaagcctgtggtgtt
gctggcgtgcgtccaggccaatactgcgaacctaagatgacgtctgtcggttcacaagat
actacaggtcctatgacccgtgatgagctgaaagacttagcctgtttaggcttcagtgcc
gatttgactatgcagtcattctgccacactgcggcttatccaaaaccagttgacgttaac
actcaccacactctgccagacttcatcatgaaccgtggcggtgtgtctctgcgtccaggt
gacggtgttatccactcttggttaaaccgtatgttattaccagacacagttggtactggt
ggtgactcacatacgcgtttcccaatcgggatttcattcccagcaggttctggtttagtg
gcattcgctgccgcgaccggtgtgatgcctctggacatgccagaatcagtattagtgcgc
ttcaagggcaagatgcaacctggcatcaccctacgtgacttagtacacgcgattccatta
aaagcgattgaaatgggtctgctgaccgttgagaagaaaggtaaagtgaacatcttctct
ggccgcgtactggaaatcgaaggcttagaaaccctgaaagtagaacaggcattcgaactg
tctgacgcttctgcagaacgctctgcagcgggttgtactatcaagttagacaaagagcca
atcatcgagtacctgaactcgaacatcactatgctgaagtggatgatcgccgaaggttac
ggtgaccgtcgtactatcgaacgtcgtatcaaaggcatggaagagtggttagcgaatcct
gagctgatgagcgcagacgccgatgccgagtacgctgcggtgatcgaaatcgatctgaac
gagatcaaagagccaatcctgtgtgcgccaaacgatccagacgatgcagtattgctgtca
tctgttgcgcaaactaagattgacgaagtgttcgtgggttcttgtatgactaacatcggt
cacttccgtgcgaccggtaagatgttagacaagttcgctaagacgctgccaacacgtctg
tggattgcaccaccgacgaagatggacaaagaccagctgaccgaagaaggttactacggt
attttcggtcgcgttggtgcgcgtatcgagatcccaggctgttcactgtgtatgggtaac
caagcacgtgtggctgaaggttctactgtggtatcgacttctacccgtaacttcccgaac
cgtttaggtacaggcgctaacgtttacttagcttctgcggaattagcggcagtagcagcc
ctgttaggtcgtctgccatcggttgaagaataccaagaatacgctaaagagttagatgca
actgcagctgacacttaccgttacttgaacttcgatcagatcgattcttacactcagaaa
gcatcacaagtgatctttcaatcagctgtataa
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