Shewanella sp. MR-4: Shewmr4_0587
Help
Entry
Shewmr4_0587 CDS
T00388
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_0587
Transporters [BR:
she02000
]
Other transporters
Pores ion channels [TC:
1
]
Shewmr4_0587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
ABI37667
LinkDB
All DBs
Position
complement(676489..679692)
Genome browser
AA seq
1067 aa
AA seq
DB search
MPRILLFVIAFFSFSLHANSPLQLDKRLGLNNQNQQQNISIDDQIVELKNNIDRLAANAS
SFQQAQLDFEENKKVIDQGLKEAAKPLKLDKATDLNQQASMAYLRLSELKESETALGNQV
SELLQRHNQLPSVIANARQNVLQNKKTDLAPLDTPTGELQQTQRIFFEQSLATNEAELAS
SQKRIELTQLQLQLVRQQLSQQEAFIETINKAMNKQRQQQTDATLAKNLVDTAKVVDPVT
RNIADTNQIYGQKLQTLTLQINNVVEQQEQAELQYQSQAKQLANIQEQITWVKMNSAFGE
RFLQMLQSLPKPPNHEKLQTLIADARLDRYHLEQQQALNEQELEQTNLYNEGQIKLLRSQ
QALLTQLMQSYDQYLSELGKLKVNYQQLSQQHLTLKNTLNEHLFWVPNAASMNKLWLTDV
QRSALWLIQEAQWGQLGKAWQEQNDYWSWWIILLVLCLVIQDLIRPKFKRLLSHYVTYVG
NVTQDKFIYTFKSLVLSLGYALIKPLPIVAAGWIFYQSERNFVQAVGMGILAIGLVYLLY
RLIFILALDKGVLVGHFKRPSKLIQAGQLRLKHFVFVASPLLGIMGFTEVLDASLIRNSI
GRGAFICFCVVLFLLYKDILVLSRQNSDTQKDGKNKRLLQKMLWALLISVPLLSAGLAFR
GYYFTAFQMLLQLQLSIVLGLSFLLLYQLIKRWMLIERRRIAFDRAKAKRAERLAQREKG
ETHHASNDGLDTYEEPVVDLETISSQSLGLVRSLLLLAFLASLIGLWTQTHTALFSFLDG
ITLWTTNTSVNGVEQQLPITMKSLLLGLIIVGFSLMIATNLPGLLELMILQRLDLTPGTG
FAITTVSRYLVVFLGLLIGFSNLGMEWSKLQWLIAALSLGLGFGLQEIFANFISGLIILF
EKPVRIGDTVTIRDLTGTVSKIQIRATTIIDWDRKEIIIPNKAFITEQLINWSLSDPITR
VIVHVSVARDSDPAKVEATLYQAVQECEDALPNPEPEVWFAGFGKHTQDYEVRAYAKEMS
ARWPLRHDLHKRITRKLKENNLELAYPQMEIHLKNGQNRDQVGIIRS
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtattttattgttcgttattgcttttttctctttttctctccatgccaattcg
ccactgcaattggacaagcgccttggcctaaacaaccaaaatcagcaacaaaatattagc
attgacgatcaaattgttgagcttaaaaacaacattgatagattggcggcgaatgcgagc
agttttcagcaggctcagctcgattttgaagaaaacaaaaaggtcatcgaccagggctta
aaagaagccgccaaacccttaaagctggacaaagccacggatctcaaccagcaagcctcg
atggcttatttacgactgtcggaattaaaagagagcgaaacggccctaggcaatcaagtc
agcgaactgttgcaacgccataatcagctgccctccgtcatcgccaacgcaagacagaat
gtgctgcaaaataagaaaaccgacttggccccactggatacgccaacgggcgaactacag
caaacgcagcggattttcttcgagcaaagcctcgccactaacgaggctgagcttgccagc
agccaaaaacgcatcgaactcacccagttacagttacagttggttcgccagcaattgagc
caacaggaagcctttattgaaaccatcaataaggcgatgaataaacagcgccagcaacaa
accgatgcaaccttggccaagaatttagtggataccgccaaggtcgtggatcctgtgacc
cgcaatattgccgacactaaccaaatctacggccaaaagttacaaaccttaaccttgcaa
atcaacaatgtggttgagcagcaagagcaggccgaactgcaatatcaatcccaagccaaa
cagctggcgaatatccaagagcaaatcacttgggtcaaaatgaactccgcctttggcgag
cgttttctgcagatgttgcaatctctgcctaagccgccaaaccatgagaagctacaaact
ctgatcgccgatgctcgcctcgataggtaccacctcgagcaacaacaggcgctcaacgaa
caagagttagagcaaaccaacctctacaacgagggacaaattaagctactgcgctcacaa
caagcgctgctgacgcagttgatgcagagttatgaccaatatttgagtgagcttggcaaa
ctcaaagtcaattatcagcaacttagccagcaacacctgaccttaaaaaacaccctcaac
gagcacttgttttgggtacccaacgccgccagcatgaacaaactctggctcaccgacgtg
caacgcagcgccctgtggctcatccaagaagcgcagtggggacaattgggcaaagcctgg
caggagcaaaatgactactggtcctggtggatcattctgttagtgctttgcttggtcatc
caagatttaatccggcctaagttcaaacgcttactcagccactatgtcacctacgtgggt
aatgtgacgcaggataaatttatctacacctttaaatccttagtcctgagccttggttat
gccctaataaaaccgctacccatagtggcggcgggatggattttctatcaatccgaacgt
aactttgtgcaggccgtcggcatggggattttagcgataggattggtttacctattgtat
cgcttgatatttattctcgccctcgacaaaggggtcttggttggccatttcaaacgcccc
tcaaaactcatccaagcaggtcagctaaggctcaaacactttgtgtttgtcgccagcccc
ctgctcggcattatgggctttaccgaagtcctcgacgcatcccttatccgcaatagcatt
ggtcgcggtgcatttatctgtttttgcgtagttttattcttgttatacaaggatatcttg
gtgctaagccgccaaaatagcgacacccaaaaggatggcaaaaacaaacgactgctgcaa
aaaatgctctgggcgctattgatctctgtgcctctgctcagtgccggactcgcctttagg
ggttactacttcaccgccttccaaatgctgttacagttacaactctccatcgtattggga
ttaagtttcttactgctttatcaattaattaagcgttggatgttgatcgagcgacgccgt
attgccttcgatcgcgccaaggccaaacgggccgaacggttagcgcagcgggaaaagggc
gagacacaccatgcctccaacgatggactcgacacctatgaagagccggtcgtcgacctc
gaaaccatttcgagtcagtccttaggcttagtccgctctttattgctactcgcattttta
gcgagcttgattggcctatggacgcaaacccatacggcgctattttccttcttagatggc
atcaccctctggactacaaacaccagcgtcaatggtgtcgagcagcagctgcctatcacc
atgaaatcgctgttattgggcttaatcatcgttggcttctcgctgatgattgccaccaat
ttacccggtctgctcgaactgatgatcctacaacggctcgacctgacgccgggcacaggc
tttgccatcactacggtaagccgttatttagtggtgtttttaggactgctgattggtttt
tcgaatctcgggatggaatggtcaaaactgcaatggctgattgccgcgctgtcactgggt
ctaggttttggtttgcaggaaatttttgccaactttatctcgggcctgattattctgttt
gaaaaaccagtgcgtattggcgatacggtgacgatccgcgatctgacggggacagtgagt
aaaattcagatccgcgccaccaccattatcgactgggatagaaaggaaattatcattcca
aacaaggcctttattaccgagcaattgattaactggtcactatcagaccccatcacgcgg
gtgatagtgcatgtgtcggttgcccgcgattcggatccggccaaagttgaggcaacgcta
tatcaagcggtgcaggaatgtgaagatgcgctgccgaatccagagcctgaagtctggttt
gcaggctttggcaaacatacccaagattacgaagttcgtgcctatgcaaaagagatgtcg
gcccgttggccgctacgccacgatctgcataaacgcatcacccgtaagcttaaagaaaac
aacttagaactcgcctatccgcaaatggaaatccatcttaaaaatggccagaatcgcgat
caggtcggcataatccgcagttaa
DBGET
integrated database retrieval system
