Shewanella sp. MR-4: Shewmr4_0591
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Entry
Shewmr4_0591 CDS
T00388
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
she
Shewanella sp. MR-4
Pathway
she03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
she00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Shewmr4_0591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
she03019
]
Shewmr4_0591
03009 Ribosome biogenesis [BR:
she03009
]
Shewmr4_0591
Messenger RNA biogenesis [BR:
she03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Shewmr4_0591
Ribosome biogenesis [BR:
she03009
]
Eukaryotic type
Pre-60S particles
RNases
Shewmr4_0591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Glyco_hydro_77
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
ABI37671
UniProt:
Q0HMP6
LinkDB
All DBs
Position
682802..683347
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AA seq
181 aa
AA seq
DB search
MAADANNLIWIDLEMTGLEPDVDRVIEIATLVTDQELNIIGQGPVIAIHQSDEVLAAMDD
WNQKHHGESGLIDRVRASQVNEAQAVAQTIAFLEQYVPKGASPMCGNSVGQDRRFLNRYM
RELEDYFHYRNLDVSTVKELVKRWSPETMAGFKKQNTHQALQDIQESIAELQYYRSKVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacgcgaataatctgatttggatcgatctcgaaatgacagggttagagccc
gatgtcgacagggtcattgaaattgctaccttagtaacagaccaagaactcaatattatc
ggtcaggggcctgttattgctattcatcaatcggatgaagtgctggcggccatggatgat
tggaaccagaaacaccacggtgaatcgggtctgatcgatagagtgcgtgctagccaagtg
aatgaagctcaggccgttgcacaaaccatcgcatttttagagcaatatgtgcctaagggc
gcatcgcctatgtgtggcaacagtgtgggccaggaccgtcgcttcttaaatcgttatatg
cgtgaactggaggattacttccattatcgcaatctcgacgttagcacggtaaaagagtta
gtgaagcgttggagccctgaaaccatggcgggtttcaaaaagcaaaatacccaccaagcg
ctgcaagatatccaagagtcgatcgcggaattacagtattaccgcagcaaagtatttaaa
atttga
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