Shewanella sp. MR-4: Shewmr4_0624
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Entry
Shewmr4_0624 CDS
T00388
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
she
Shewanella sp. MR-4
Pathway
she00550
Peptidoglycan biosynthesis
she01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Shewmr4_0624
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
she01003
]
Shewmr4_0624
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
she01011
]
Shewmr4_0624
Enzymes [BR:
she01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Shewmr4_0624
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Shewmr4_0624
Glycosyltransferases [BR:
she01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Shewmr4_0624
Peptidoglycan biosynthesis and degradation proteins [BR:
she01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Shewmr4_0624
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Motif
Other DBs
NCBI-ProteinID:
ABI37704
LinkDB
All DBs
Position
722630..724924
Genome browser
AA seq
764 aa
AA seq
DB search
MTTKTTKKAKAKRSRGLLGQMWSLTWKLALIGLAVVTFYSIYLDQIIARKFEGQKWHLPA
QVFSRSMALYPGAAVSHPQLMAELKLLGYRKVANPREVGEFSASSTKIELWRRPFLHPEG
DQAEQRVMISFDSDGISSIARMSDKRQLAIFHLEPVLLDRIIAGDGEDRLFVPTEEMPKA
IVKALLLVEDRSFYEHHGVNPFAILRAAFVNISAGRTVQGGSTLTQQLAKNFFLSSERSL
LRKIREALMAVIIDFRYSKEEILEAYLNEVYMGQDKSRAVHGMGLASQFYFGRPIGELTT
AQQAFLVAAIKGPSYYNPWRYPERSQERRDLVLRLLMEAGELSTAQYKVAVESPLGLRNA
NKPVHQKLPAFYALVKQELNERYGDALLKQSGVKIYTTLDPMAQEAAEIAVTQTFKSLDK
GNKSLQIGMVVTDKYTGGIAAMVGDKTPGFDGYNRAVEIRRPIGSLVKPFVYATALAPNS
QFTLASPLKDQPITLKNEQGKTWSPQNFDKKFSGQVSLLTALKKSMNVPTVNLGIAVGVD
AVATTLAKSGWQEPLNEYPSMLLGAVNGSPLMVAQVYQTLADSGAYRKLTTVTAVLDSHN
QPLPVTRSPKEQAITPDTDFLVQYAMQQVVRSGTATRLGNAFPGVALAGKTGTSNDSRDS
WFAGFDERNVAAIWVGRDDNGKTSLYGSSGAMAVYQAFLKERPPIGLRSIPPTGVIQGYF
DRDTGEAKEAGCRNTEALPALRGTYNPAKNCGEPLQWWQKILGQ
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgacaactaagacgacaaaaaaagcgaaagcgaagcgcagccgtggcctgttagggcaa
atgtggtcgctcacttggaaactagccttaatcggcctagccgttgtgaccttctacagt
atttacctcgatcaaattattgcccgcaagtttgaggggcaaaaatggcacttacccgcg
caggtatttagccgctcgatggccttatatcccggcgctgccgtaagtcatccacagtta
atggccgaactcaaactcttaggttatcgcaaagttgccaatccccgtgaggtcggtgag
ttctcggcatccagcaccaaaatcgaattatggcgtcgtcccttcttacatcctgagggc
gatcaggccgagcagcgggtgatgattagcttcgacagcgatgggatcagctcgattgcg
cgtatgtcagataagcgccagttggcgatattccatttagaacctgtcttgctcgaccgc
attattgcgggtgacggcgaagacagattgtttgtccccacagaagaaatgcccaaggcg
attgtaaaagccttgctgctggtggaagaccgcagtttttacgagcatcacggggtcaac
cccttcgcgattctgcgcgccgcttttgtgaatatcagtgcggggcgaactgtgcagggc
ggctcgacactcacccagcagttggcgaaaaacttcttcctctcgagcgaacgctctttg
ctgcgtaaaattcgcgaagccttaatggcggtgattatcgattttcgttatagcaaggaa
gaaatcctcgaggcctacctcaacgaagtgtatatggggcaagataaatcccgcgccgtg
catgggatggggctggcttcacagttctattttggtcgacccatcggcgagctaaccacg
gcgcagcaagcgtttttagtggcggcgattaagggaccttcctattacaacccatggcgt
tatcctgagcgcagccaagagcgtcgcgatttagtgctgcgtctcttgatggaagcgggt
gaactgagcaccgcgcaatacaaggtggcggtagagtcgcccttaggcttacgtaacgcc
aataaaccagtgcatcaaaagctacctgcattttatgccttggttaaacaagagcttaac
gagcgctatggtgatgcgttattaaaacaatctggagtgaagatttacaccacactcgat
ccaatggcgcaggaagccgccgaaatcgccgtgactcaaacctttaagagcttagataaa
ggcaataagtcgttgcagattggtatggtggttacagacaaatacactggcggtatcgca
gctatggtcggtgataagacgccaggctttgatggttataaccgcgcggttgagatccgc
agacccataggctcgctcgtcaagccatttgtgtatgcgaccgcattggcaccgaatagc
cagtttaccttggcttcgccacttaaagatcagccgattaccctaaagaatgagcagggc
aaaacttggtcaccgcagaactttgataagaagtttagcggacaagtctcgttattaacg
gcgctgaaaaagtcgatgaacgtacctacggtgaacctcgggattgccgtgggggtggat
gcggtggcaaccacactagcgaaatctggctggcaagagccgcttaacgaatacccctct
atgttattgggcgccgtgaatggttcgcccttgatggtggcgcaggtttatcagacactg
gccgatagtggcgcctatcgtaaactcactacggtcacggcggtgctcgatagtcacaat
cagccattacctgttacacgctcaccgaaggagcaagccattacgccggatactgatttc
ttggtgcaatatgctatgcagcaagtggtgcgctcgggtacggcaacacgtttaggcaat
gccttcccaggcgtagcactggcgggtaaaaccggtaccagtaacgatagccgcgactct
tggttcgcgggttttgatgagcgtaacgtcgcggcgatttgggtcggacgcgacgataac
ggcaagaccagcctctacggtagcagtggcgcgatggcggtgtatcaagccttcttgaag
gagcgtccaccgattgggctacgctcgattccgccaacgggcgtgatccaaggttacttt
gaccgtgataccggtgaagctaaggaggcgggatgccgcaataccgaggcattgccagcc
cttagaggtacctataatcctgcgaaaaactgcggtgagccgttgcagtggtggcagaag
attttaggtcagtaa
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