Shewanella sp. MR-4: Shewmr4_0670
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Entry
Shewmr4_0670 CDS
T00388
Name
(GenBank) Uncharacterized P-loop ATPase protein UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
she03019
]
Shewmr4_0670
Messenger RNA biogenesis [BR:
she03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Shewmr4_0670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_16
AAA_22
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ABI37750
UniProt:
Q0HMG7
LinkDB
All DBs
Position
complement(780114..780968)
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AA seq
284 aa
AA seq
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MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNL
PEQDKVLVKQLTSLPEGTELTSFFLNSSDKVLLKRYSETRRLHPLSKSRVSLQEAIKLEG
KLLEPLSQQMDHYIDTSNLNIYELSDQVRQILLGSVDKELVINFESFGFKHGMPTEADFM
FDVRFLPNPHWEPELRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY
LTIAIGCTGGQHRSVYVAEQLAKRFSNGKHKVNARHRELSHAKA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggtcatagtgtcagggcgctcaggctcaggcaaatcggtcgcacttagagtg
cttgaagatctcggctattattgtgtcgataatctccccttgccgttgattggcagctta
ctcgaacagctcaagggcagtaacgatctcgtcgccatcagcgtcgacgtgcgtaatctg
ccggagcaagacaaggtactcgtcaaacagctcacaagcctgcccgagggcactgaactc
accagcttcttcttaaattccagcgataaagtactgctaaagcgctacagcgagactcgg
cgcttacatcccttatctaagagccgagtatcactgcaagaagccatcaaacttgaaggc
aaattgctcgagcccctgtcacaacagatggatcactacatagatacctcgaatctgaat
atctatgaactcagcgaccaagtgcggcaaatcctgcttggcagtgtcgataaggaactg
gtgatcaacttcgagtccttcggttttaagcatggtatgccaaccgaagccgactttatg
tttgatgtgcgctttttacccaatccccattgggaacccgagctgcgccctctcaccggc
ttagatgaacccgttgccgagtttttaaatcgccagccgcttgtcaataagttcatctgg
caaattgagaatttactcgagacttggttgcctcacttagagcgtaataaccgcagctat
ctgaccatcgccatcggctgtaccggcggtcaacacagatcagtttacgtggccgagcaa
ctggctaaacgctttagcaacggtaaacacaaagtgaatgcccgccaccgagagttaagc
catgccaaagcttga
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